Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033778_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 82.46 | 83.19 |
| EER93563 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 80.26 | 80.97 |
| TraesCS4D01G050300.1 | Wheat | plasma membrane | 77.19 | 77.19 |
| TraesCS4B01G049900.1 | Wheat | plasma membrane | 76.75 | 76.75 |
| TraesCS4A01G264900.1 | Wheat | plasma membrane | 76.32 | 76.32 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 56.14 | 58.18 |
| HORVU4Hr1G008200.8 | Barley | cytosol, mitochondrion, plasma membrane | 55.26 | 54.08 |
| KRH58610 | Soybean | plasma membrane | 43.86 | 47.17 |
| KRH49716 | Soybean | plasma membrane | 41.23 | 44.13 |
| PGSC0003DMT400058674 | Potato | plasma membrane | 28.95 | 43.42 |
| Bra026808.1-P | Field mustard | plasma membrane | 42.54 | 43.3 |
| CDY33743 | Canola | plasma membrane | 42.54 | 43.3 |
| Solyc01g005150.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 42.54 | 43.3 |
| CDX81667 | Canola | plasma membrane | 42.11 | 42.86 |
| KRG89270 | Soybean | plasma membrane | 34.65 | 42.25 |
| KRH42515 | Soybean | golgi, plasma membrane | 40.79 | 42.08 |
| CDY45283 | Canola | plasma membrane | 40.79 | 41.52 |
| AT1G14730.1 | Thale cress | plasma membrane | 40.79 | 41.52 |
| CDY41099 | Canola | plasma membrane | 40.35 | 41.07 |
| Bra026193.1-P | Field mustard | plasma membrane | 40.35 | 41.07 |
| Os10t0504200-01 | Rice | plasma membrane | 40.79 | 40.43 |
| VIT_01s0011g06240.t01 | Wine grape | plasma membrane | 37.72 | 39.63 |
| Os04t0533500-02 | Rice | plasma membrane | 39.47 | 38.14 |
| Os08t0101700-01 | Rice | golgi, plasma membrane, plastid | 38.6 | 36.97 |
| Os08t0384000-01 | Rice | plasma membrane | 35.53 | 34.62 |
| Os02t0642300-01 | Rice | extracellular, golgi, mitochondrion | 12.72 | 28.16 |
Protein Annotations
| Gene3D:1.20.120.1770 | MapMan:35.1 | EntrezGene:9266417 | ProteinID:ABF98559.1 | ProteinID:BAH92345.1 | ProteinID:BAS86085.1 |
| InterPro:Cyt_b561/ferric_Rdtase_TM | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR006593 | EnsemblPlantsGene:Os03g0717200 |
| EnsemblPlants:Os03t0717200-00 | PFAM:PF03188 | PFscan:PS50939 | PANTHER:PTHR10106 | PANTHER:PTHR10106:SF36 | UniProt:Q10DW5 |
| SMART:SM00665 | TMHMM:TMhelix | UniParc:UPI000000272A | RefSeq:XP_015629965.1 | SEG:seg | : |
Description
Cytochrome b561 family protein. (Os03t0717200-00)
Coordinates
chr3:+:29028308..29030763
Molecular Weight (calculated)
24214.2 Da
IEP (calculated)
8.301
GRAVY (calculated)
1.027
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIGGGIIGG GGHHSAVAAR VAAAAHVLFL TTAVLMLVWL LHFRGGINIQ SDDPEQIFNV HPFVMCWGFI LLIGEAILAY TTIPMDHRTQ KMVHMLVHLV
101: ALILAIFGVY AAFKFHDAAV APDLVSLHSW LGILAVALFG LQWLFGFFAF WLPGTHERTR AAAAPAHVAA GLAIFMLAVC AAETGLVQKS AAAASAGEAK
201: LINVTGIFIL LYAVAVAVAV ALRKAFFY
101: ALILAIFGVY AAFKFHDAAV APDLVSLHSW LGILAVALFG LQWLFGFFAF WLPGTHERTR AAAAPAHVAA GLAIFMLAVC AAETGLVQKS AAAASAGEAK
201: LINVTGIFIL LYAVAVAVAV ALRKAFFY
001: MNLSGDRTTL KRHSSLSTLV AHFFGILAVV LMLIWLLHYR EGIEYGSDNP LKVLNVHPFL MYCGFLFLVG QAMMTYKTAY ASHQVQKMVH GGLHLIGLVL
101: GIVGICAAFR FHDKVNLKDM VSLHSWIGLT TFILLGVQWL FGAFTFLAPQ SSSGTRTRMM PWHVLGGRAL LYMGIVAALT GLMQRATMLG QSTNAESRLI
201: NFLGLAILLF GVSVDFSVAL GRYN
101: GIVGICAAFR FHDKVNLKDM VSLHSWIGLT TFILLGVQWL FGAFTFLAPQ SSSGTRTRMM PWHVLGGRAL LYMGIVAALT GLMQRATMLG QSTNAESRLI
201: NFLGLAILLF GVSVDFSVAL GRYN
Arabidopsis Description
CYB561CProbable transmembrane ascorbate ferrireductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.