Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22226 | Canola | cytosol | 76.82 | 98.31 |
| CDY54855 | Canola | cytosol | 86.75 | 86.75 |
| CDY44127 | Canola | cytosol | 86.75 | 86.75 |
| AT4G23680.1 | Thale cress | cytosol | 80.79 | 80.79 |
| AT4G23670.1 | Thale cress | cytosol | 75.5 | 75.5 |
| CDY17667 | Canola | cytosol | 73.51 | 73.51 |
| CDY68854 | Canola | cytosol | 73.51 | 73.51 |
| CDY10958 | Canola | cytosol | 72.19 | 72.19 |
| CDY70188 | Canola | cytosol | 72.19 | 72.19 |
| CDY66340 | Canola | cytosol | 72.19 | 72.19 |
| CDY62739 | Canola | cytosol | 71.52 | 71.52 |
| CDY70133 | Canola | cytosol | 70.86 | 70.86 |
| CDY67068 | Canola | cytosol | 70.86 | 70.86 |
| CDY53523 | Canola | cytosol | 45.7 | 70.41 |
| CDY66633 | Canola | cytosol | 69.54 | 69.54 |
| CDY41329 | Canola | cytosol | 68.21 | 68.21 |
| CDY49951 | Canola | cytosol | 68.21 | 68.21 |
| CDY54858 | Canola | cytosol | 44.37 | 66.34 |
| CDY56716 | Canola | cytosol | 29.8 | 66.18 |
| CDY10959 | Canola | cytosol | 62.91 | 64.63 |
| CDX81683 | Canola | cytosol | 62.25 | 62.25 |
| CDY68124 | Canola | cytosol | 59.6 | 59.6 |
| CDY35450 | Canola | cytosol | 44.37 | 57.27 |
| CDY68125 | Canola | cytosol | 50.99 | 53.85 |
| CDY72258 | Canola | cytosol | 32.45 | 44.95 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 24.5 | 24.5 |
| KRG89345 | Soybean | nucleus | 24.5 | 24.18 |
| KRH50391 | Soybean | cytosol | 17.88 | 21.43 |
Protein Annotations
| EnsemblPlants:CDY41328 | EnsemblPlantsGene:GSBRNA2T00072881001 | Gene3D:3.30.530.20 | GO:A0A078HX37 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PANTHER:PTHR31338:SF18 | PFAM:PF00407 | ProteinID:CDY41328 | ProteinID:CDY41328.1 | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI0004EF1B1D | UniProt:A0A078HX37 | MapMan:35.1 | : | : | : |
Description
BnaA01g31910DBnaA01g31910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HX37]
Coordinates
chrLK032495:-:135394..136910
Molecular Weight (calculated)
17453.6 Da
IEP (calculated)
6.605
GRAVY (calculated)
-0.752
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGTYVTE VPLKGAAEKH YKKWKSENHI FPDAIGHHIK NVTVHEGESD SHGSIRSWNY TWDGKEEVFK EKREVDDENL TLALRGLEGH VMEQLKVFDV
101: IYQFIPKTED TSSCKITIIW EKRKDEYPEP STYMKFNKSL IVDMGHHASK A
101: IYQFIPKTED TSSCKITIIW EKRKDEYPEP STYMKFNKSL IVDMGHHASK A
001: MATSGTYVTE VPLKGSAEKY YKRWKNENHV FPDAIGHHIQ NVTVHEGEHD SHGSIRSWNY TWDGKEEVFK ERREIDDETK TLTLRGLEGH VMEQLKVYDV
101: VYQFIPKSED TCIGKITLIW EKRNDDSPEP SGYMKFVKSL VADMGNHVSK T
101: VYQFIPKSED TCIGKITLIW EKRNDDSPEP SGYMKFVKSL VADMGNHVSK T
Arabidopsis Description
AT4g23680/F9D16_150 [Source:UniProtKB/TrEMBL;Acc:Q9SUQ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.