Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G14950.1 | Thale cress | cytosol | 86.09 | 83.87 |
| CDY68124 | Canola | cytosol | 74.83 | 74.83 |
| CDY67068 | Canola | cytosol | 74.17 | 74.17 |
| CDY70133 | Canola | cytosol | 74.17 | 74.17 |
| CDY68854 | Canola | cytosol | 73.51 | 73.51 |
| CDY66633 | Canola | cytosol | 73.51 | 73.51 |
| CDY70188 | Canola | cytosol | 72.85 | 72.85 |
| CDY66340 | Canola | cytosol | 72.85 | 72.85 |
| CDY17667 | Canola | cytosol | 72.19 | 72.19 |
| CDY49951 | Canola | cytosol | 71.52 | 71.52 |
| CDY68125 | Canola | cytosol | 66.89 | 70.63 |
| CDY41329 | Canola | cytosol | 69.54 | 69.54 |
| CDY54858 | Canola | cytosol | 46.36 | 69.31 |
| CDY53523 | Canola | cytosol | 44.37 | 68.37 |
| CDY54855 | Canola | cytosol | 67.55 | 67.55 |
| CDY44127 | Canola | cytosol | 67.55 | 67.55 |
| CDY62739 | Canola | cytosol | 64.9 | 64.9 |
| Bra026793.1-P | Field mustard | cytosol | 78.81 | 64.67 |
| CDY10958 | Canola | cytosol | 63.58 | 63.58 |
| CDY56716 | Canola | cytosol | 28.48 | 63.24 |
| CDY41328 | Canola | cytosol | 62.25 | 62.25 |
| CDY22226 | Canola | cytosol | 48.34 | 61.86 |
| CDY72258 | Canola | cytosol | 44.37 | 61.47 |
| CDY35450 | Canola | cytosol | 45.7 | 58.97 |
| CDY10959 | Canola | cytosol | 56.29 | 57.82 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 29.8 | 29.8 |
| KRG89345 | Soybean | nucleus | 24.5 | 24.18 |
| KRH50391 | Soybean | cytosol | 18.54 | 22.22 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | GO:A0A078D301 | InterPro:Bet_v_I/MLP | EnsemblPlants:CDX81683 | ProteinID:CDX81683 |
| ProteinID:CDX81683.1 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009607 | EnsemblPlantsGene:GSBRNA2T00136606001 |
| InterPro:IPR023393 | PFAM:PF00407 | PANTHER:PTHR31338 | PANTHER:PTHR31338:SF18 | SMART:SM01037 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | UniParc:UPI0004EF0779 | : | : | : | : |
Description
BnaC08g39180D
Coordinates
chrLK031826:-:360774..363621
Molecular Weight (calculated)
17646.1 Da
IEP (calculated)
7.663
GRAVY (calculated)
-0.795
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMSGTYVTE VPLKGSAKNH YKRWRSENHL FPDAVGHHIQ GVKVHEGDWD SHGAIKSWNY TCDGKQEVFK EKREFDDDKM AVTFRGLEGH VMEQLKVYDF
101: IPKTKQGCIC KVTMMWEKRY ENSPEPINYM KFVTNMAADM DDHILKDQKK V
101: IPKTKQGCIC KVTMMWEKRY ENSPEPINYM KFVTNMAADM DDHILKDQKK V
001: MATSGTYVTE VPLKGSAKNH YKRWKSENQL FPDAIGHHIQ GVTVHEGDWD SHGAIKSWNY TCDGKQEVFK EKRELDDQKM AVTFRGLDGH VMEQLKVYDV
101: IFQFVPKSQE GCVCKVTMFW EKRYEDSPEP IKYMKFVTSL AADMDDHILK NQSKA
101: IFQFVPKSQE GCVCKVTMFW EKRYEDSPEP IKYMKFVTSL AADMDDHILK NQSKA
Arabidopsis Description
At1g14950/F10B6_18 [Source:UniProtKB/TrEMBL;Acc:Q39132]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.