Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70188 | Canola | cytosol | 99.34 | 99.34 |
| Bra010541.1-P | Field mustard | cytosol | 98.68 | 98.68 |
| CDY41329 | Canola | cytosol | 90.73 | 90.73 |
| CDY66633 | Canola | cytosol | 88.08 | 88.08 |
| CDY70133 | Canola | cytosol | 80.13 | 80.13 |
| CDY67068 | Canola | cytosol | 80.13 | 80.13 |
| CDY56716 | Canola | cytosol | 35.76 | 79.41 |
| CDY68854 | Canola | cytosol | 76.82 | 76.82 |
| CDY54858 | Canola | cytosol | 50.99 | 76.24 |
| CDY17667 | Canola | cytosol | 76.16 | 76.16 |
| CDY44127 | Canola | cytosol | 76.16 | 76.16 |
| CDY49951 | Canola | cytosol | 76.16 | 76.16 |
| CDY54855 | Canola | cytosol | 76.16 | 76.16 |
| CDY10958 | Canola | cytosol | 74.17 | 74.17 |
| CDY62739 | Canola | cytosol | 74.17 | 74.17 |
| CDY22226 | Canola | cytosol | 56.95 | 72.88 |
| CDX81683 | Canola | cytosol | 72.85 | 72.85 |
| CDY35450 | Canola | cytosol | 56.29 | 72.65 |
| CDY41328 | Canola | cytosol | 72.19 | 72.19 |
| CDY68124 | Canola | cytosol | 70.2 | 70.2 |
| CDY53523 | Canola | cytosol | 45.03 | 69.39 |
| CDY10959 | Canola | cytosol | 64.24 | 65.99 |
| CDY68125 | Canola | cytosol | 62.25 | 65.73 |
| CDY72258 | Canola | cytosol | 33.77 | 46.79 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 27.81 | 27.81 |
| KRG89345 | Soybean | nucleus | 25.83 | 25.49 |
| KRH50391 | Soybean | cytosol | 19.87 | 23.81 |
Protein Annotations
| EnsemblPlants:CDY66340 | EnsemblPlantsGene:GSBRNA2T00053411001 | Gene3D:3.30.530.20 | GO:A0A078JIQ5 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PANTHER:PTHR31338:SF18 | PFAM:PF00407 | ProteinID:CDY66340 | ProteinID:CDY66340.1 | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI0004EED3D4 | UniProt:A0A078JIQ5 | MapMan:35.1 | : | : | : |
Description
BnaC03g76760DBnaC03g76760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIQ5]
Coordinates
chrLK035208:-:3736..6328
Molecular Weight (calculated)
17574.9 Da
IEP (calculated)
6.085
GRAVY (calculated)
-0.636
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGTYVTE VPLKGTVEKH YKKWRSENHA FPEAIGHHIQ NVIIHDGEWD SHGAIKTWNY TCDGKPEVFK ERREIDDEKK TVTFRGLEGH VMEQLKVYDV
101: ILEFIPKSED GCVCKITMIW EKRTDEFPEP SNYMKFVKSM VADMDDHVLK A
101: ILEFIPKSED GCVCKITMIW EKRTDEFPEP SNYMKFVKSM VADMDDHVLK A
001: MATSGTYVTE VPLKGSAKNH YKRWKSENQL FPDAIGHHIQ GVTVHEGDWD SHGAIKSWNY TCDGKQEVFK EKRELDDQKM AVTFRGLDGH VMEQLKVYDV
101: IFQFVPKSQE GCVCKVTMFW EKRYEDSPEP IKYMKFVTSL AADMDDHILK NQSKA
101: IFQFVPKSQE GCVCKVTMFW EKRYEDSPEP IKYMKFVTSL AADMDDHILK NQSKA
Arabidopsis Description
At1g14950/F10B6_18 [Source:UniProtKB/TrEMBL;Acc:Q39132]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.