Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56716 | Canola | cytosol | 47.52 | 70.59 |
| CDY53523 | Canola | cytosol | 53.47 | 55.1 |
| CDY70133 | Canola | cytosol | 79.21 | 52.98 |
| CDY67068 | Canola | cytosol | 79.21 | 52.98 |
| CDY66633 | Canola | cytosol | 78.22 | 52.32 |
| CDY68854 | Canola | cytosol | 77.23 | 51.66 |
| CDY70188 | Canola | cytosol | 76.24 | 50.99 |
| CDY17667 | Canola | cytosol | 76.24 | 50.99 |
| CDY66340 | Canola | cytosol | 76.24 | 50.99 |
| CDY41329 | Canola | cytosol | 73.27 | 49.01 |
| CDY62739 | Canola | cytosol | 73.27 | 49.01 |
| CDY10958 | Canola | cytosol | 72.28 | 48.34 |
| CDY49951 | Canola | cytosol | 72.28 | 48.34 |
| CDY54855 | Canola | cytosol | 71.29 | 47.68 |
| CDY44127 | Canola | cytosol | 71.29 | 47.68 |
| CDY72258 | Canola | cytosol | 50.49 | 46.79 |
| CDX81683 | Canola | cytosol | 69.31 | 46.36 |
| CDY41328 | Canola | cytosol | 66.34 | 44.37 |
| CDY68124 | Canola | cytosol | 65.35 | 43.71 |
| CDY10959 | Canola | cytosol | 63.37 | 43.54 |
| CDY22226 | Canola | cytosol | 44.55 | 38.14 |
| CDY68125 | Canola | cytosol | 53.47 | 37.76 |
| CDY35450 | Canola | cytosol | 39.6 | 34.19 |
| KRH50391 | Soybean | cytosol | 20.79 | 16.67 |
| KRG89345 | Soybean | nucleus | 23.76 | 15.69 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 21.78 | 14.57 |
Protein Annotations
| EnsemblPlants:CDY54858 | EnsemblPlantsGene:GSBRNA2T00014768001 | Gene3D:3.30.530.20 | GO:A0A078IZY5 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PANTHER:PTHR31338:SF18 | PFAM:PF00407 | ProteinID:CDY54858 | ProteinID:CDY54858.1 | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI0004EED8A1 | UniProt:A0A078IZY5 | MapMan:35.1 | : | : | : |
Description
BnaC01g15490DBnaC01g15490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZY5]
Coordinates
chrLK033356:-:49394..50447
Molecular Weight (calculated)
11707.6 Da
IEP (calculated)
6.632
GRAVY (calculated)
-0.928
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGTYVTE VPLKGTAEKH YKRWRNENHA FPDAVGHHIQ SVTVHDGEWD SHGAIKIWNY TLTNKQYVNL EKQEVFKERR EIDDEKKTSL AADMDDHVIK
101: A
101: A
001: MATSGTYVTE VPLKGTAEKH FQRWRNENHL FPDAVGHHIQ GVSVHDGEWD THGSIKIWNY TLGDGKQEEF KERREMDDEN NTMKVVGLEG HVMEQLKVYE
101: IDFQFIPKSE EDCICKITMI WEKRNDDFPE PSSYMQLLKS MVIDMEDHVL KA
101: IDFQFIPKSE EDCICKITMI WEKRNDDFPE PSSYMQLLKS MVIDMEDHVL KA
Arabidopsis Description
Major latex protein-like [Source:UniProtKB/TrEMBL;Acc:Q9LIM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.