Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56716 | Canola | cytosol | 33.03 | 52.94 |
| CDY54858 | Canola | cytosol | 46.79 | 50.49 |
| CDY53523 | Canola | cytosol | 44.95 | 50.0 |
| CDX81683 | Canola | cytosol | 61.47 | 44.37 |
| AT1G14950.1 | Thale cress | cytosol | 56.88 | 40.0 |
| CDY68854 | Canola | cytosol | 52.29 | 37.75 |
| CDY70133 | Canola | cytosol | 51.38 | 37.09 |
| CDY17667 | Canola | cytosol | 51.38 | 37.09 |
| CDY67068 | Canola | cytosol | 51.38 | 37.09 |
| Bra026793.1-P | Field mustard | cytosol | 61.47 | 36.41 |
| CDY66633 | Canola | cytosol | 49.54 | 35.76 |
| CDY49951 | Canola | cytosol | 48.62 | 35.1 |
| CDY62739 | Canola | cytosol | 48.62 | 35.1 |
| CDY10958 | Canola | cytosol | 47.71 | 34.44 |
| CDY41329 | Canola | cytosol | 46.79 | 33.77 |
| CDY70188 | Canola | cytosol | 46.79 | 33.77 |
| CDY66340 | Canola | cytosol | 46.79 | 33.77 |
| CDY68124 | Canola | cytosol | 46.79 | 33.77 |
| CDY54855 | Canola | cytosol | 44.95 | 32.45 |
| CDY41328 | Canola | cytosol | 44.95 | 32.45 |
| CDY44127 | Canola | cytosol | 44.95 | 32.45 |
| CDY10959 | Canola | cytosol | 41.28 | 30.61 |
| CDY68125 | Canola | cytosol | 36.7 | 27.97 |
| CDY22226 | Canola | cytosol | 30.28 | 27.97 |
| CDY35450 | Canola | cytosol | 26.61 | 24.79 |
| KRH50391 | Soybean | cytosol | 17.43 | 15.08 |
| KRG89345 | Soybean | nucleus | 20.18 | 14.38 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 14.68 | 10.6 |
Protein Annotations
| EnsemblPlants:CDY72258 | EnsemblPlantsGene:GSBRNA2T00025996001 | Gene3D:3.30.530.20 | GO:A0A078JXC2 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PANTHER:PTHR31338:SF18 | PFAM:PF00407 | ProteinID:CDY72258 | ProteinID:CDY72258.1 | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI0004EE66FE | UniProt:A0A078JXC2 | MapMan:35.1 | : | : | : |
Description
BnaCnng76760DBnaCnng76760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXC2]
Coordinates
chrLK049766:-:960..1738
Molecular Weight (calculated)
12324.4 Da
IEP (calculated)
5.795
GRAVY (calculated)
-0.585
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMSGTYVTD AHICIGPDLV TEVSLKGSAK NHYKRCENHF FSDAVGHHIQ GVYVHEGVWD THSAIKLVYE DGKQEVLTEK REFDDDKMAV SARGLEDMDD
101: HFLKNEKKA
101: HFLKNEKKA
001: MATSGTYVTE VPLKGSAKNH YKRWKSENQL FPDAIGHHIQ GVTVHEGDWD SHGAIKSWNY TCDGKQEVFK EKRELDDQKM AVTFRGLDGH VMEQLKVYDV
101: IFQFVPKSQE GCVCKVTMFW EKRYEDSPEP IKYMKFVTSL AADMDDHILK NQSKA
101: IFQFVPKSQE GCVCKVTMFW EKRYEDSPEP IKYMKFVTSL AADMDDHILK NQSKA
Arabidopsis Description
At1g14950/F10B6_18 [Source:UniProtKB/TrEMBL;Acc:Q39132]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.