Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034100.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY66340 | Canola | cytosol | 90.73 | 90.73 |
| CDY70188 | Canola | cytosol | 90.73 | 90.73 |
| CDY66633 | Canola | cytosol | 84.77 | 84.77 |
| CDY56716 | Canola | cytosol | 37.75 | 83.82 |
| CDY70133 | Canola | cytosol | 76.16 | 76.16 |
| CDY67068 | Canola | cytosol | 76.16 | 76.16 |
| CDY44127 | Canola | cytosol | 73.51 | 73.51 |
| CDY54855 | Canola | cytosol | 73.51 | 73.51 |
| CDY62739 | Canola | cytosol | 73.51 | 73.51 |
| CDY10958 | Canola | cytosol | 73.51 | 73.51 |
| CDY54858 | Canola | cytosol | 49.01 | 73.27 |
| CDY68854 | Canola | cytosol | 72.85 | 72.85 |
| CDY35450 | Canola | cytosol | 56.29 | 72.65 |
| CDY17667 | Canola | cytosol | 72.19 | 72.19 |
| CDY49951 | Canola | cytosol | 72.19 | 72.19 |
| CDX81683 | Canola | cytosol | 69.54 | 69.54 |
| CDY22226 | Canola | cytosol | 53.64 | 68.64 |
| CDY41328 | Canola | cytosol | 68.21 | 68.21 |
| CDY68124 | Canola | cytosol | 67.55 | 67.55 |
| CDY10959 | Canola | cytosol | 64.24 | 65.99 |
| CDY53523 | Canola | cytosol | 41.72 | 64.29 |
| CDY68125 | Canola | cytosol | 59.6 | 62.94 |
| CDY72258 | Canola | cytosol | 33.77 | 46.79 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 27.81 | 27.81 |
| KRG89345 | Soybean | nucleus | 27.81 | 27.45 |
| KRH50391 | Soybean | cytosol | 21.19 | 25.4 |
Protein Annotations
| EnsemblPlants:CDY41329 | EnsemblPlantsGene:GSBRNA2T00072882001 | Gene3D:3.30.530.20 | GO:A0A078HVE0 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PANTHER:PTHR31338:SF18 | PFAM:PF00407 | ProteinID:CDY41329 | ProteinID:CDY41329.1 | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI00025441AB | UniProt:A0A078HVE0 | MapMan:35.1 | : | : | : |
Description
BnaA01g31900DBnaA01g31900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVE0]
Coordinates
chrLK032495:-:138855..140301
Molecular Weight (calculated)
17602.0 Da
IEP (calculated)
5.560
GRAVY (calculated)
-0.641
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGTYVTE VPLKGTMEKH YKRWRSENHA IPEAIGHHIQ NVTIHEGEWD SHGAIKTWDY TCDGKPEVLK ERTEIDDEKK TVTFRGLEGH FMEQLKVYDV
101: IFEFIPKLED GCVCKITMIW EKRNDEFPEP SNYMKVVKSM VADMEDHVLK A
101: IFEFIPKLED GCVCKITMIW EKRNDEFPEP SNYMKVVKSM VADMEDHVLK A
001: MATSGTYVTE VPLKGSAKNH YKRWKSENQL FPDAIGHHIQ GVTVHEGDWD SHGAIKSWNY TCDGKQEVFK EKRELDDQKM AVTFRGLDGH VMEQLKVYDV
101: IFQFVPKSQE GCVCKVTMFW EKRYEDSPEP IKYMKFVTSL AADMDDHILK NQSKA
101: IFQFVPKSQE GCVCKVTMFW EKRYEDSPEP IKYMKFVTSL AADMDDHILK NQSKA
Arabidopsis Description
At1g14950/F10B6_18 [Source:UniProtKB/TrEMBL;Acc:Q39132]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.