Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17667 | Canola | cytosol | 95.36 | 95.36 |
| CDY70133 | Canola | cytosol | 90.07 | 90.07 |
| CDY67068 | Canola | cytosol | 90.07 | 90.07 |
| AT2G01520.1 | Thale cress | cytosol | 89.4 | 89.4 |
| AT4G14060.1 | Thale cress | cytosol | 86.75 | 86.75 |
| AT2G01530.1 | Thale cress | cytosol | 85.43 | 85.43 |
| CDY49951 | Canola | cytosol | 84.77 | 84.77 |
| CDY66633 | Canola | cytosol | 81.46 | 81.46 |
| CDY54855 | Canola | cytosol | 78.81 | 78.81 |
| CDY44127 | Canola | cytosol | 78.81 | 78.81 |
| CDY54858 | Canola | cytosol | 51.66 | 77.23 |
| CDY66340 | Canola | cytosol | 76.82 | 76.82 |
| CDY70188 | Canola | cytosol | 76.16 | 76.16 |
| CDY41328 | Canola | cytosol | 73.51 | 73.51 |
| CDX81683 | Canola | cytosol | 73.51 | 73.51 |
| CDY22226 | Canola | cytosol | 56.95 | 72.88 |
| CDY62739 | Canola | cytosol | 72.85 | 72.85 |
| CDY41329 | Canola | cytosol | 72.85 | 72.85 |
| CDY10958 | Canola | cytosol | 72.19 | 72.19 |
| CDY68124 | Canola | cytosol | 71.52 | 71.52 |
| CDY53523 | Canola | cytosol | 45.7 | 70.41 |
| CDY68125 | Canola | cytosol | 62.91 | 66.43 |
| CDY56716 | Canola | cytosol | 29.8 | 66.18 |
| CDY10959 | Canola | cytosol | 60.26 | 61.9 |
| CDY35450 | Canola | cytosol | 47.68 | 61.54 |
| CDY72258 | Canola | cytosol | 37.75 | 52.29 |
| KRG89345 | Soybean | nucleus | 27.15 | 26.8 |
| KRH50391 | Soybean | cytosol | 21.19 | 25.4 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 25.17 | 25.17 |
Protein Annotations
| EnsemblPlants:CDY68854 | EnsemblPlantsGene:GSBRNA2T00080437001 | Gene3D:3.30.530.20 | GO:A0A078JPZ3 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PANTHER:PTHR31338:SF18 | PFAM:PF00407 | ProteinID:CDY68854 | ProteinID:CDY68854.1 | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI0004EAE6E9 | UniProt:A0A078JPZ3 | MapMan:35.1 | : | : | : |
Description
BnaC07g48800DBnaC07g48800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPZ3]
Coordinates
chrLK038130:+:1800..2698
Molecular Weight (calculated)
17492.7 Da
IEP (calculated)
6.417
GRAVY (calculated)
-0.637
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGTYVTE VPLKGSAEKH YKRWKTENHL FPDAIGHHIQ GVTVHDGEWD SHGSIKIWNY TCDGKQEVFK ERRENDDENM AVTLRGLEGH VMEQLKVYDV
101: IFQFIQKSPS DIVCKITMIW EKRTDDSPEP INYMKFVKSL AADMDHHVIK S
101: IFQFIQKSPS DIVCKITMIW EKRTDDSPEP INYMKFVKSL AADMDHHVIK S
001: MATSGTYVTE VPLKGSAEKH YKRWRSENHL FPDAIGHHIQ GVTIHDGEWD SHGAIKIWNY TCDGKPEVFK ERREIDDENM AVTFRGLEGH VMEQLKVYDV
101: IFQFIQKSPD DIICKITMIW EKQNDDMPEP SNYMKFVKSL AADMDDHVLK A
101: IFQFIQKSPD DIICKITMIW EKQNDDMPEP SNYMKFVKSL AADMDDHVLK A
Arabidopsis Description
MLP328MLP-like protein 328 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.