Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
26746009
|
msms PMID:
26746009
doi
National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: fangsenxu@mail.hzau.edu.cn., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034757.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY42148 | Canola | nucleus | 96.57 | 97.04 |
| CDX73823 | Canola | cytosol | 91.67 | 93.03 |
| CDY00769 | Canola | cytosol | 91.67 | 93.03 |
| AT3G12390.1 | Thale cress | cytosol | 85.78 | 86.21 |
| CDY71160 | Canola | nucleus | 85.29 | 86.14 |
| CDY50549 | Canola | nucleus | 85.29 | 86.14 |
| Solyc10g078150.1.1 | Tomato | nucleus | 73.04 | 75.25 |
| CDX69622 | Canola | cytosol | 75.98 | 75.24 |
| GSMUA_Achr10P... | Banana | nucleus | 72.55 | 74.0 |
| CDY09831 | Canola | nucleus | 74.51 | 73.79 |
| VIT_13s0067g00710.t01 | Wine grape | nucleus | 73.04 | 73.76 |
| TraesCS1D01G236500.1 | Wheat | cytosol | 74.02 | 73.66 |
| KRH66664 | Soybean | endoplasmic reticulum | 73.04 | 73.4 |
| TraesCS1B01G248000.1 | Wheat | golgi, plastid, unclear | 73.04 | 72.68 |
| Solyc10g081030.1.1 | Tomato | nucleus | 70.59 | 72.36 |
| Os01t0938900-02 | Rice | nucleus | 71.57 | 72.28 |
| PGSC0003DMT400018552 | Potato | nucleus | 70.1 | 72.22 |
| KRG95031 | Soybean | endoplasmic reticulum | 71.08 | 71.78 |
| KRH66666 | Soybean | endoplasmic reticulum | 69.61 | 71.72 |
| Os05t0373700-01 | Rice | extracellular, golgi, plasma membrane, plastid | 72.06 | 71.71 |
| HORVU1Hr1G057970.2 | Barley | nucleus | 72.55 | 70.81 |
| Zm00001d029173_P004 | Maize | nucleus | 71.57 | 70.53 |
| KRG95032 | Soybean | nucleus | 70.59 | 70.24 |
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 68.63 | 70.0 |
| Zm00001d049830_P002 | Maize | extracellular | 71.08 | 69.71 |
| EES15306 | Sorghum | nucleus | 70.1 | 69.08 |
| Zm00001d047477_P001 | Maize | plastid | 68.63 | 68.97 |
| CDY31855 | Canola | cytosol | 46.08 | 68.61 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 67.65 | 68.32 |
| TraesCS4A01G138000.1 | Wheat | plastid, unclear | 69.61 | 68.27 |
| EER94856 | Sorghum | nucleus | 69.12 | 68.12 |
| PGSC0003DMT400072220 | Potato | cytosol, endoplasmic reticulum, nucleus | 65.69 | 67.0 |
| TraesCS4B01G154200.1 | Wheat | nucleus | 67.16 | 66.5 |
| TraesCS4D01G164400.1 | Wheat | nucleus | 67.16 | 66.18 |
| TraesCS3A01G474500.1 | Wheat | nucleus | 60.78 | 65.26 |
| TraesCS3B01G518200.1 | Wheat | cytosol | 42.16 | 65.15 |
| TraesCS3B01G518000.1 | Wheat | cytosol, nucleus, plastid | 64.71 | 65.02 |
| TraesCS3B01G518300.1 | Wheat | cytosol, nucleus, plastid | 61.27 | 62.81 |
| TraesCS3A01G474200.1 | Wheat | nucleus | 60.78 | 62.63 |
| TraesCS3D01G470600.2 | Wheat | cytosol | 58.82 | 62.5 |
| TraesCS3A01G474600.1 | Wheat | cytosol | 60.29 | 61.81 |
| TraesCS3B01G517400.1 | Wheat | cytosol | 60.29 | 61.81 |
| TraesCSU01G140100.1 | Wheat | nucleus | 59.8 | 61.31 |
| TraesCS3D01G470500.1 | Wheat | cytosol, nucleus, plastid | 55.39 | 60.11 |
| HORVU3Hr1G102520.6 | Barley | cytosol, nucleus | 60.78 | 59.9 |
| HORVU2Hr1G015260.1 | Barley | cytosol, nucleus, plastid | 58.33 | 58.91 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 59.8 | 58.37 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 58.82 | 58.25 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 58.82 | 57.69 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 57.35 | 57.35 |
| TraesCS3A01G474800.1 | Wheat | cytosol, nucleus, plastid | 56.37 | 56.93 |
| GSMUA_Achr5P17540_001 | Banana | endoplasmic reticulum, extracellular, golgi | 66.18 | 56.49 |
| TraesCS3B01G518400.1 | Wheat | cytosol | 53.92 | 56.12 |
| TraesCSU01G140000.1 | Wheat | nucleus | 54.9 | 55.17 |
| CDX86860 | Canola | cytosol | 56.86 | 54.72 |
| TraesCS3B01G517500.1 | Wheat | cytosol, golgi, nucleus | 51.47 | 46.67 |
| CDX99543 | Canola | nucleus | 38.73 | 43.89 |
| CDY54248 | Canola | cytosol | 45.1 | 41.44 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | UniProt:A0A078F9H9 | EnsemblPlants:CDY08433 | ProteinID:CDY08433 |
| ProteinID:CDY08433.1 | InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005854 | EnsemblPlantsGene:GSBRNA2T00000194001 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom |
| PFAM:PF01849 | PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF16 | SMART:SM01407 |
| UniParc:UPI0002547392 | SEG:seg | : | : | : | : |
Description
BnaA05g26690DBnaA05g26690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9H9]
Coordinates
chrLK031986:-:167938..169231
Molecular Weight (calculated)
22049.4 Da
IEP (calculated)
4.081
GRAVY (calculated)
-0.722
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTEEKEILA AKLEEQKIDL DKPEVEDADD NDEDDSDDDD KDDDAEGQDG EGGKSKQSRS EKKSRKAMLK LGMKPITGVS RVTVKKSKNI MFVISKPDVF
101: KSPASDTYVI FGEAKIEDLS SQIQSQAAEQ FKAPDLSNVV SQGESSSSAS AVVQDDDEDI DEEGVDAKDV ELVMTQAGVT RPKAVKALKA ADGDIVTAIM
201: ELTT
101: KSPASDTYVI FGEAKIEDLS SQIQSQAAEQ FKAPDLSNVV SQGESSSSAS AVVQDDDEDI DEEGVDAKDV ELVMTQAGVT RPKAVKALKA ADGDIVTAIM
201: ELTT
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.