Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G474500.1 | Wheat | nucleus | 81.16 | 88.42 |
| TraesCS3B01G518000.1 | Wheat | cytosol, nucleus, plastid | 83.57 | 85.22 |
| HORVU3Hr1G102310.1 | Barley | cytosol | 23.19 | 77.42 |
| TraesCS3B01G518200.1 | Wheat | cytosol | 48.79 | 76.52 |
| HORVU2Hr1G015260.1 | Barley | cytosol, nucleus, plastid | 70.53 | 72.28 |
| Os01t0938900-02 | Rice | nucleus | 69.08 | 70.79 |
| GSMUA_Achr10P... | Banana | nucleus | 67.63 | 70.0 |
| Solyc10g081030.1.1 | Tomato | nucleus | 67.15 | 69.85 |
| KRH66666 | Soybean | endoplasmic reticulum | 66.18 | 69.19 |
| VIT_13s0067g00710.t01 | Wine grape | nucleus | 66.67 | 68.32 |
| Solyc10g078150.1.1 | Tomato | nucleus | 65.22 | 68.18 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 65.7 | 67.33 |
| PGSC0003DMT400018552 | Potato | nucleus | 64.25 | 67.17 |
| HORVU1Hr1G057970.2 | Barley | nucleus | 67.63 | 66.99 |
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 64.25 | 66.5 |
| KRH66664 | Soybean | endoplasmic reticulum | 64.73 | 66.01 |
| KRG95031 | Soybean | endoplasmic reticulum | 64.25 | 65.84 |
| AT3G12390.1 | Thale cress | cytosol | 63.28 | 64.53 |
| AT5G13850.1 | Thale cress | cytosol | 62.8 | 63.73 |
| KRG95032 | Soybean | nucleus | 62.8 | 63.41 |
| CDX73823 | Canola | cytosol | 61.35 | 63.18 |
| CDY00769 | Canola | cytosol | 61.35 | 63.18 |
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 41.55 | 62.77 |
| CDY42148 | Canola | nucleus | 61.35 | 62.56 |
| CDY50549 | Canola | nucleus | 60.87 | 62.38 |
| CDY71160 | Canola | nucleus | 60.39 | 61.88 |
| PGSC0003DMT400072220 | Potato | cytosol, endoplasmic reticulum, nucleus | 59.42 | 61.5 |
| CDX69622 | Canola | cytosol | 60.87 | 61.16 |
| Bra038716.1-P | Field mustard | cytosol | 39.13 | 60.9 |
| CDY08433 | Canola | plasma membrane | 59.9 | 60.78 |
| Bra034757.1-P | Field mustard | cytosol | 59.9 | 60.78 |
| CDY09831 | Canola | nucleus | 60.39 | 60.68 |
| Bra008797.1-P | Field mustard | cytosol | 60.87 | 60.58 |
| Bra001450.1-P | Field mustard | cytosol | 55.07 | 60.32 |
| GSMUA_Achr5P17540_001 | Banana | endoplasmic reticulum, extracellular, golgi | 66.18 | 57.32 |
| HORVU3Hr1G102230.1 | Barley | nucleus | 20.77 | 43.43 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | UniProt:A0A287MI92 | InterPro:EGD2/NACA | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | EnsemblPlantsGene:HORVU3Hr1G102520 | EnsemblPlants:HORVU3Hr1G102520.6 |
| InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 | PIRSF:PIRSF015901 |
| PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF16 | SMART:SM01407 | UniParc:UPI000B466781 | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:+:664903675..664905798
Molecular Weight (calculated)
22374.9 Da
IEP (calculated)
4.336
GRAVY (calculated)
-0.708
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: AAALSCGCKS ERNFKRALIN QSPLVGDEPI IEDDDDDDED DDEDEDEKDD DDVEGGDASG RSRQSRSEKK SRKAMEKLGM KAITGVSRVT IKKNKSVMFV
101: LSKPDVFKSS NSDTYVMFGE AKIEDLSTQL HSQAAEQFKA PGPSGVISKG RPAMAAAQDD EEVDETGVDK KDIELVMAQA SVPRSRAVKA LKAADGDIVS
201: AIMELTN
101: LSKPDVFKSS NSDTYVMFGE AKIEDLSTQL HSQAAEQFKA PGPSGVISKG RPAMAAAQDD EEVDETGVDK KDIELVMAQA SVPRSRAVKA LKAADGDIVS
201: AIMELTN
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.