Factsheet for HORVU4Hr1G084900.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31855	Canola	cytosol	70.8	70.8
TraesCS4D01G342400.1	Wheat	nucleus	99.27	61.26
TraesCS5A01G516100.1	Wheat	nucleus	98.54	60.81
TraesCS4B01G347400.1	Wheat	nucleus	96.35	60.0
HORVU3Hr1G102310.1	Barley	cytosol	27.01	59.68
Os03t0121700-01	Rice	plasma membrane	90.51	56.11
EER95617	Sorghum	cytosol	88.32	53.54
Zm00001d048479_P002	Maize	plastid	89.05	53.51
GSMUA_Achr1P06350_001	Banana	cytosol	79.56	50.93
Bra012259.1-P	Field mustard	cytosol	70.8	50.52
GSMUA_Achr5P20310_001	Banana	mitochondrion	72.99	50.51
CDY05102	Canola	cytosol, nucleus, plastid	72.26	48.53
CDX90758	Canola	cytosol, nucleus, plastid	71.53	47.12
Bra000711.1-P	Field mustard	cytosol, nucleus, plastid	71.53	47.12
CDY31852	Canola	cytosol, nucleus, plastid	70.07	45.93
CDX86860	Canola	cytosol	70.8	45.75
Bra037920.1-P	Field mustard	cytosol	70.8	45.75
CDY01344	Canola	cytosol, nucleus, plastid	68.61	45.63
HORVU1Hr1G057970.2	Barley	nucleus	68.61	44.98
HORVU3Hr1G102520.6	Barley	cytosol, nucleus	62.77	41.55
HORVU3Hr1G102230.1	Barley	nucleus	28.47	39.39
HORVU2Hr1G015260.1	Barley	cytosol, nucleus, plastid	56.93	38.61
CDY54248	Canola	cytosol	52.55	32.43
CDX99543	Canola	nucleus	42.34	32.22
Os01t0698900-00	Rice	plasma membrane	71.53	25.65
Os07t0407300-00	Rice	cytosol, nucleus, plastid	17.52	19.67

Protein Annotations

EnsemblPlants:HORVU4Hr1G084900.2	EnsemblPlantsGene:HORVU4Hr1G084900	Gene3D:1.10.8.10	Gene3D:2.20.70.30	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005854	InterPro:EGD2/NACA	InterPro:IPR002715	InterPro:IPR038187
InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	PANTHER:PTHR21713	PANTHER:PTHR21713:SF7	PFAM:PF01849	PFscan:PS51151
SEG:seg	SMART:SM01407	UniParc:UPI000B484B4B	UniProt:A0A287PYU0	MapMan:19.1.2.1.1	:

Description

No Description!

Coordinates

chrchr4H:+:630335254..630336042

Molecular Weight (calculated)

14639.7 Da

IEP (calculated)

5.246

GRAVY (calculated)

-0.010

Length

137 amino acids

Sequence
(BLAST)

001: MMKLGMKPVT GVSRITIKRA KNILFVVSKP DVFKSPTSET YVIFGEAKIE DLSSQLQAQA AQQFRMQDLS KAMRPDAAAA AGAGAVADEE EVVDETGIEA
101: RDIDLVMTQA SVSRAKAVKA LKAHDGDIVS AIMELTA

Best Arabidopsis Sequence Match ( AT1G33040.1 )
(BLAST)

001: MPGAIVEEEK SQIESIKEQL KLEKEDDVVV EDVKDGEEED DDEDDEDVEV EGEGGNENAK QSRSEKKSRK AVLKLGMKPV SDVSRVTIKR AKNVLFVISK
101: PDVYKSPNAE TYVIFGEAKV DDLSSQLQTQ AAQRFKMPDV TSMLPNAGSE ATMAPLAEEE DEDDVDDTGV EARDIDLVMT QAGVSKAKAV SALKANDGDI
201: VSAIMELTT

Arabidopsis Description

NACA5Nascent polypeptide-associated complex subunit alpha-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGC6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.