Factsheet for GSMUA_Achr1P06350_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G084900.2	Barley	mitochondrion	50.93	79.56
CDY31855	Canola	cytosol	48.13	75.18
Bra000711.1-P	Field mustard	cytosol, nucleus, plastid	64.02	65.87
CDX90758	Canola	cytosol, nucleus, plastid	64.02	65.87
CDY05102	Canola	cytosol, nucleus, plastid	61.68	64.71
Bra012259.1-P	Field mustard	cytosol	57.94	64.58
GSMUA_Achr10P...	Banana	nucleus	60.28	64.5
CDY31852	Canola	cytosol, nucleus, plastid	62.62	64.11
CDY01344	Canola	cytosol, nucleus, plastid	60.75	63.11
TraesCS4D01G342400.1	Wheat	nucleus	64.95	62.61
GSMUA_Achr1P11330_001	Banana	plasma membrane	58.41	62.5
TraesCS4B01G347400.1	Wheat	nucleus	64.02	62.27
CDX86860	Canola	cytosol	61.68	62.26
Bra037920.1-P	Field mustard	cytosol	61.68	62.26
TraesCS5A01G516100.1	Wheat	nucleus	64.02	61.71
Os03t0121700-01	Rice	plasma membrane	63.55	61.54
EER95617	Sorghum	cytosol	64.49	61.06
Zm00001d048479_P002	Maize	plastid	64.95	60.96
GSMUA_Achr5P17540_001	Banana	endoplasmic reticulum, extracellular, golgi	60.28	53.97
GSMUA_Achr5P20310_001	Banana	mitochondrion	48.6	52.53
CDX99543	Canola	nucleus	43.93	52.22
GSMUA_Achr11P...	Banana	cytosol	37.38	48.48
CDY54248	Canola	cytosol	44.86	43.24
Os07t0407300-00	Rice	cytosol, nucleus, plastid	23.36	40.98
Os01t0698900-00	Rice	plasma membrane	52.34	29.32

Protein Annotations

Gene3D:1.10.8.10	MapMan:19.1.2.1.1	Gene3D:2.20.70.30	InterPro:EGD2/NACA	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005854	EnsemblPlantsGene:GSMUA_Achr1G06350_001	EnsemblPlants:GSMUA_Achr1P06350_001	EnsemblPlants:GSMUA_Achr1T06350_001
InterPro:IPR002715	InterPro:IPR038187	UniProt:M0RXJ3	InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	PFAM:PF01849
PIRSF:PIRSF015901	PFscan:PS51151	PANTHER:PTHR21713	PANTHER:PTHR21713:SF7	SMART:SM01407	UniParc:UPI00029668B0
SEG:seg	:	:	:	:	:

Description

Nascent polypeptide-associated complex subunit alpha-like protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G06350_001]

Coordinates

chr1:+:5105717..5108825

Molecular Weight (calculated)

23398.2 Da

IEP (calculated)

4.146

GRAVY (calculated)

-0.765

Length

214 amino acids

Sequence
(BLAST)

001: MPGPKMVEDE TKDNENITSL KEEQRQLLKE DAPIVDVEDE KDGEDDDDED DDDEVGGEQG LGANENSKQS RSEKKSRKAM LKLGMKPVTG VSRVTIKRTK
101: NILFVISKPD VFKSPNSETY VIFGEAKIED LSSQLQSQAA QQFRMPDLSN AMAKPDESAA AVVDEDEEDV DETGVEPRDI ELVMTQAGVS KGKAVKALKA
201: HDGDIVGAIM DLTA

Best Arabidopsis Sequence Match ( AT3G49470.1 )
(BLAST)

001: MSPPPAVVTE SADGQPEQPP VTAIAEELEK KLQTDEPIVE DVKDDEDDDD DDEEEEDDDA QGVSGSSKQS RSEKKSRKAM LKLGMKPVTG VSRVTIKRTK
101: NVLFFISKPD VFKSPHSETY VIFGEAKIED LSSQLQTQAA QQFRMPEIGA TSQRAEASTA TVEAQVEEDE EEIDETGVEA RDIDLVMTQA GVSRSKAVKA
201: LKSHDGDIVS AIMELTT

Arabidopsis Description

NACA2Nascent polypeptide-associated complex subunit alpha-like protein 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR04]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.