Factsheet for GSMUA_Achr1P11330_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	88.0	88.0
Solyc10g081030.1.1	Tomato	nucleus	83.5	83.92
VIT_13s0067g00710.t01	Wine grape	nucleus	84.5	83.66
VIT_08s0040g00600.t01	Wine grape	cytosol	84.5	83.66
KRH66666	Soybean	endoplasmic reticulum	81.5	82.32
PGSC0003DMT400018552	Potato	nucleus	79.5	80.3
Solyc10g078150.1.1	Tomato	nucleus	78.5	79.29
KRG95031	Soybean	endoplasmic reticulum	80.0	79.21
KRH66664	Soybean	endoplasmic reticulum	80.0	78.82
KRG95032	Soybean	nucleus	80.0	78.05
AT3G12390.1	Thale cress	cytosol	78.5	77.34
Os01t0938900-02	Rice	nucleus	77.5	76.73
Os05t0373700-01	Rice	extracellular, golgi, plasma membrane, plastid	78.0	76.1
TraesCS1D01G236500.1	Wheat	cytosol	78.0	76.1
HORVU1Hr1G057970.2	Barley	nucleus	79.0	75.6
PGSC0003DMT400072220	Potato	cytosol, endoplasmic reticulum, nucleus	75.5	75.5
TraesCS1B01G248000.1	Wheat	golgi, plastid, unclear	77.0	75.12
EES15306	Sorghum	nucleus	77.0	74.4
Zm00001d047477_P001	Maize	plastid	75.5	74.38
AT5G13850.1	Thale cress	cytosol	75.5	74.02
EER94856	Sorghum	nucleus	76.5	73.91
CDY09831	Canola	nucleus	76.0	73.79
Bra038716.1-P	Field mustard	cytosol	48.5	72.93
CDY50549	Canola	nucleus	73.5	72.77
CDY71160	Canola	nucleus	73.0	72.28
TraesCS4A01G138000.1	Wheat	plastid, unclear	75.0	72.12
Zm00001d029173_P004	Maize	nucleus	74.5	71.98
TraesCS4B01G154200.1	Wheat	nucleus	74.0	71.84
TraesCS4D01G164400.1	Wheat	nucleus	74.0	71.5
CDY00769	Canola	cytosol	71.5	71.14
CDX73823	Canola	cytosol	71.5	71.14
CDX69622	Canola	cytosol	73.0	70.87
Bra001450.1-P	Field mustard	cytosol	66.5	70.37
Zm00001d049830_P002	Maize	extracellular	73.0	70.19
Bra008797.1-P	Field mustard	cytosol	73.0	70.19
GSMUA_Achr5P17540_001	Banana	endoplasmic reticulum, extracellular, golgi	83.0	69.46
Bra034757.1-P	Field mustard	cytosol	70.0	68.63
CDY08433	Canola	plasma membrane	70.0	68.63
CDY42148	Canola	nucleus	69.5	68.47
TraesCS3A01G474500.1	Wheat	nucleus	65.0	68.42
TraesCS3B01G518300.1	Wheat	cytosol, nucleus, plastid	68.0	68.34
TraesCS3D01G470600.2	Wheat	cytosol	65.0	67.71
TraesCS3A01G474200.1	Wheat	nucleus	66.5	67.17
TraesCS3B01G518000.1	Wheat	cytosol, nucleus, plastid	67.5	66.5
TraesCS3B01G518200.1	Wheat	cytosol	43.5	65.91
TraesCS3D01G470500.1	Wheat	cytosol, nucleus, plastid	61.5	65.43
TraesCS3B01G517400.1	Wheat	cytosol	64.0	64.32
TraesCS3A01G474600.1	Wheat	cytosol	64.0	64.32
HORVU3Hr1G102520.6	Barley	cytosol, nucleus	66.5	64.25
TraesCSU01G140100.1	Wheat	nucleus	63.5	63.82
HORVU2Hr1G015260.1	Barley	cytosol, nucleus, plastid	62.5	61.88
TraesCS3B01G518400.1	Wheat	cytosol	60.5	61.73
TraesCS3A01G474800.1	Wheat	cytosol, nucleus, plastid	59.0	58.42
GSMUA_Achr1P06350_001	Banana	cytosol	62.5	58.41
TraesCSU01G140000.1	Wheat	nucleus	58.0	57.14
TraesCS3B01G517500.1	Wheat	cytosol, golgi, nucleus	53.0	47.11
GSMUA_Achr5P20310_001	Banana	mitochondrion	46.0	46.46
GSMUA_Achr11P...	Banana	cytosol	34.5	41.82

Protein Annotations

Gene3D:1.10.8.10	MapMan:19.1.2.1.1	Gene3D:2.20.70.30	InterPro:EGD2/NACA	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005854	EnsemblPlantsGene:GSMUA_Achr1G11330_001	EnsemblPlants:GSMUA_Achr1P11330_001	EnsemblPlants:GSMUA_Achr1T11330_001
InterPro:IPR002715	InterPro:IPR038187	UniProt:M0RYZ2	InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	PFAM:PF01849
PIRSF:PIRSF015901	PFscan:PS51151	PANTHER:PTHR21713	PANTHER:PTHR21713:SF16	SMART:SM01407	UniParc:UPI0002956093
SEG:seg	:	:	:	:	:

Description

Nascent polypeptide-associated complex subunit alpha-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G11330_001]

Coordinates

chr1:+:8654116..8658827

Molecular Weight (calculated)

21924.5 Da

IEP (calculated)

4.150

GRAVY (calculated)

-0.673

Length

200 amino acids

Sequence
(BLAST)

001: MTAQTQEELL AAHLEQQKID LDEPVVEDDE DDVDDEDDDD KDDDAEGQAD DATGRSKQSR SEKKSRKAML KLGMKPIPGV TRVTVKKSKN ILFVISKPDV
101: FKSPTSDSYV IFGEAKIEDL SSQLQTQAAE QFKAPDLSHV ISKPETSAMV QDDEEVDETG VEPKDIELVM TQAGVSRSKA VKALKAAEGD IVTAIMELTN

Best Arabidopsis Sequence Match ( AT3G12390.1 )
(BLAST)

001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT

Arabidopsis Description

Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.