Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G164400.1 | Wheat | nucleus | 91.26 | 90.82 |
| TraesCS4A01G138000.1 | Wheat | plastid, unclear | 85.44 | 84.62 |
| Zm00001d047477_P001 | Maize | plastid | 80.1 | 81.28 |
| EER94856 | Sorghum | nucleus | 80.58 | 80.19 |
| EES15306 | Sorghum | nucleus | 80.1 | 79.71 |
| Zm00001d029173_P004 | Maize | nucleus | 77.67 | 77.29 |
| GSMUA_Achr10P... | Banana | nucleus | 74.76 | 77.0 |
| Zm00001d049830_P002 | Maize | extracellular | 77.18 | 76.44 |
| VIT_13s0067g00710.t01 | Wine grape | nucleus | 74.76 | 76.24 |
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 71.84 | 74.0 |
| Solyc10g081030.1.1 | Tomato | nucleus | 70.87 | 73.37 |
| KRG95031 | Soybean | endoplasmic reticulum | 71.36 | 72.77 |
| KRH66666 | Soybean | endoplasmic reticulum | 68.93 | 71.72 |
| TraesCS1B01G248000.1 | Wheat | golgi, plastid, unclear | 70.87 | 71.22 |
| Solyc10g078150.1.1 | Tomato | nucleus | 68.45 | 71.21 |
| AT3G12390.1 | Thale cress | cytosol | 69.9 | 70.94 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 69.42 | 70.79 |
| PGSC0003DMT400018552 | Potato | nucleus | 67.96 | 70.71 |
| AT5G13850.1 | Thale cress | cytosol | 69.9 | 70.59 |
| KRG95032 | Soybean | nucleus | 69.9 | 70.24 |
| CDX73823 | Canola | cytosol | 68.45 | 70.15 |
| CDY00769 | Canola | cytosol | 68.45 | 70.15 |
| KRH66664 | Soybean | endoplasmic reticulum | 68.45 | 69.46 |
| PGSC0003DMT400072220 | Potato | cytosol, endoplasmic reticulum, nucleus | 66.99 | 69.0 |
| CDY50549 | Canola | nucleus | 67.48 | 68.81 |
| Bra038716.1-P | Field mustard | cytosol | 44.17 | 68.42 |
| CDY71160 | Canola | nucleus | 66.5 | 67.82 |
| Bra001450.1-P | Field mustard | cytosol | 62.14 | 67.72 |
| CDY42148 | Canola | nucleus | 66.5 | 67.49 |
| CDY08433 | Canola | plasma membrane | 66.5 | 67.16 |
| Bra034757.1-P | Field mustard | cytosol | 66.5 | 67.16 |
| CDX69622 | Canola | cytosol | 66.02 | 66.02 |
| Bra008797.1-P | Field mustard | cytosol | 66.02 | 65.38 |
| CDY09831 | Canola | nucleus | 65.05 | 65.05 |
| TraesCS3B01G518000.1 | Wheat | cytosol, nucleus, plastid | 62.14 | 63.05 |
| TraesCS3B01G518300.1 | Wheat | cytosol, nucleus, plastid | 59.71 | 61.81 |
| TraesCS3B01G517400.1 | Wheat | cytosol | 57.77 | 59.8 |
| GSMUA_Achr5P17540_001 | Banana | endoplasmic reticulum, extracellular, golgi | 68.93 | 59.41 |
| TraesCS3B01G518200.1 | Wheat | cytosol | 37.86 | 59.09 |
| TraesCS3B01G518400.1 | Wheat | cytosol | 51.94 | 54.59 |
| TraesCS4B01G347400.1 | Wheat | nucleus | 58.25 | 54.55 |
| TraesCS3B01G517500.1 | Wheat | cytosol, golgi, nucleus | 49.03 | 44.89 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | ncoils:Coil | InterPro:EGD2/NACA | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | InterPro:IPR002715 | InterPro:IPR038187 |
| InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 | PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 |
| PANTHER:PTHR21713:SF8 | SMART:SM01407 | EnsemblPlantsGene:TraesCS4B01G154200 | EnsemblPlants:TraesCS4B01G154200.1 | TIGR:cd14358 | SEG:seg |
Description
No Description!
Coordinates
chr4B:-:272068056..272071714
Molecular Weight (calculated)
22419.7 Da
IEP (calculated)
4.006
GRAVY (calculated)
-0.731
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAQTAEELA AHIEQEQLEA KKTEQAEEVV VEDDDDDDDD DEDDDDNDDL DGQEGDASGT SKQSRSEKKS RKAMLKLGMK SITGVSRVTV KKSKNILFVI
101: SKPDVFKSPN SETYVIFGEA KIEDLSSQLQ SQAAEQFKAP DLSQMISSPE ASGMENDDNE VVNDEGVEPK DIELVMTQAG VSRAKAVRAL KSANGDIVTA
201: IMEVTT
101: SKPDVFKSPN SETYVIFGEA KIEDLSSQLQ SQAAEQFKAP DLSQMISSPE ASGMENDDNE VVNDEGVEPK DIELVMTQAG VSRAKAVRAL KSANGDIVTA
201: IMEVTT
001: MTAEQKVELA AKLEEQKIDL DKPEVEDDDD NDEDDSEDDD EAEGHDGEAG GRSKQSRSEK KSRKAMLKLG MKPITGVSRV TVKKSKNILF VISKPDVFKS
101: PASDTYVIFG EAKIEDLSSQ LQSQAAEQFK APNLSNVISQ GETSSAATAA AVQDDDDEEV DEEGVEPKDI ELVMTQAGVS KPRAVKALKL ANGDIVSAIM
201: ELTT
101: PASDTYVIFG EAKIEDLSSQ LQSQAAEQFK APNLSNVISQ GETSSAATAA AVQDDDDEEV DEEGVEPKDI ELVMTQAGVS KPRAVKALKL ANGDIVSAIM
201: ELTT
Arabidopsis Description
NACA3Nascent polypeptide-associated complex subunit alpha-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6ICZ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.