Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G516100.1 | Wheat | nucleus | 97.73 | 96.85 |
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 60.0 | 96.35 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 94.55 | 93.69 |
| Os03t0121700-01 | Rice | plasma membrane | 76.36 | 76.02 |
| EER95617 | Sorghum | cytosol | 75.0 | 73.01 |
| CDY31855 | Canola | cytosol | 44.09 | 70.8 |
| Zm00001d048479_P002 | Maize | plastid | 72.27 | 69.74 |
| Solyc03g080160.2.1 | Tomato | nucleus | 62.27 | 67.16 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 62.73 | 65.71 |
| KRH64285 | Soybean | endoplasmic reticulum | 65.0 | 64.13 |
| KRH53644 | Soybean | endoplasmic reticulum | 65.0 | 64.13 |
| GSMUA_Achr1P06350_001 | Banana | cytosol | 62.27 | 64.02 |
| KRH64284 | Soybean | endoplasmic reticulum | 63.18 | 63.76 |
| PGSC0003DMT400001566 | Potato | cytosol | 58.64 | 63.24 |
| KRH53645 | Soybean | endoplasmic reticulum | 64.09 | 62.67 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 57.73 | 60.77 |
| Bra000711.1-P | Field mustard | cytosol, nucleus, plastid | 57.27 | 60.58 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 57.27 | 60.58 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 55.91 | 60.29 |
| Bra012259.1-P | Field mustard | cytosol | 52.27 | 59.9 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 55.0 | 58.74 |
| Bra037920.1-P | Field mustard | cytosol | 56.36 | 58.49 |
| CDX86860 | Canola | cytosol | 56.36 | 58.49 |
| TraesCS4B01G154200.1 | Wheat | nucleus | 54.55 | 58.25 |
| TraesCS1B01G248000.1 | Wheat | golgi, plastid, unclear | 53.64 | 57.56 |
| TraesCS3B01G518000.1 | Wheat | cytosol, nucleus, plastid | 51.36 | 55.66 |
| Os07t0407300-00 | Rice | cytosol, nucleus, plastid | 30.45 | 54.92 |
| AT3G49470.2 | Thale cress | cytosol | 56.82 | 53.88 |
| TraesCS3B01G518200.1 | Wheat | cytosol | 32.27 | 53.79 |
| TraesCS3B01G518300.1 | Wheat | cytosol, nucleus, plastid | 47.73 | 52.76 |
| TraesCS3B01G517400.1 | Wheat | cytosol | 46.82 | 51.76 |
| GSMUA_Achr5P20310_001 | Banana | mitochondrion | 45.45 | 50.51 |
| CDX99543 | Canola | nucleus | 39.09 | 47.78 |
| TraesCS3B01G518400.1 | Wheat | cytosol | 42.27 | 47.45 |
| CDY54248 | Canola | cytosol | 42.27 | 41.89 |
| TraesCS3B01G517500.1 | Wheat | cytosol, golgi, nucleus | 37.73 | 36.89 |
| Os01t0698900-00 | Rice | plasma membrane | 62.73 | 36.13 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G347400.1 | EnsemblPlantsGene:TraesCS4B01G347400 | Gene3D:1.10.8.10 | Gene3D:2.20.70.30 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | InterPro:EGD2/NACA | InterPro:IPR002715 | InterPro:IPR038187 |
| InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 | PFAM:PF01849 | PFscan:PS51151 |
| PIRSF:PIRSF015901 | SEG:seg | SMART:SM01407 | TIGR:cd14358 | MapMan:19.1.2.1.1 | : |
Description
No Description!
Coordinates
chr4B:-:641270073..641271353
Molecular Weight (calculated)
23600.3 Da
IEP (calculated)
3.992
GRAVY (calculated)
-0.603
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSEQTPVAT EPELESGDAA PEVIKAEEPA EDGAPVVEDV KEGDGDEEEE EDEDDDEDDE DEDGELGVAG SEGSKQSRSE KKSRKAMMKL GMKPVTGVSR
101: ITIKRAKNIL FVVSKPDVFK SPTSETYVIF GEAKIEDLSS QLQAQAAQQF RMQDLSKAMR PDAAAAGAPA DEEEVVDETG IEARDIDLVM TQASVSRAKA
201: VKALKAHDGD IVSAIMELTA
101: ITIKRAKNIL FVVSKPDVFK SPTSETYVIF GEAKIEDLSS QLQAQAAQQF RMQDLSKAMR PDAAAAGAPA DEEEVVDETG IEARDIDLVM TQASVSRAKA
201: VKALKAHDGD IVSAIMELTA
001: MPGAIVEEEK SQIESIKEQL KLEKEDDVVV EDVKDGEEED DDEDDEDVEV EGEGGNENAK QSRSEKKSRK AVLKLGMKPV SDVSRVTIKR AKNVLFVISK
101: PDVYKSPNAE TYVIFGEAKV DDLSSQLQTQ AAQRFKMPDV TSMLPNAGSE ATMAPLAEEE DEDDVDDTGV EARDIDLVMT QAGVSKAKAV SALKANDGDI
201: VSAIMELTT
101: PDVYKSPNAE TYVIFGEAKV DDLSSQLQTQ AAQRFKMPDV TSMLPNAGSE ATMAPLAEEE DEDDVDDTGV EARDIDLVMT QAGVSKAKAV SALKANDGDI
201: VSAIMELTT
Arabidopsis Description
NACA5Nascent polypeptide-associated complex subunit alpha-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGC6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.