Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g080160.2.1 | Tomato | nucleus | 58.62 | 66.67 |
| PGSC0003DMT400001566 | Potato | cytosol | 58.19 | 66.18 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 59.05 | 65.24 |
| KRH64284 | Soybean | endoplasmic reticulum | 60.34 | 64.22 |
| KRH53644 | Soybean | endoplasmic reticulum | 61.21 | 63.68 |
| KRH64285 | Soybean | endoplasmic reticulum | 59.91 | 62.33 |
| KRH53645 | Soybean | endoplasmic reticulum | 59.48 | 61.33 |
| AT3G12390.1 | Thale cress | cytosol | 53.45 | 61.08 |
| AT4G10480.1 | Thale cress | cytosol | 53.02 | 58.02 |
| TraesCS5A01G516100.1 | Wheat | nucleus | 55.17 | 57.66 |
| TraesCS4B01G347400.1 | Wheat | nucleus | 53.88 | 56.82 |
| Os03t0121700-01 | Rice | plasma membrane | 53.88 | 56.56 |
| AT5G13850.1 | Thale cress | cytosol | 49.14 | 55.88 |
| Zm00001d048479_P002 | Maize | plastid | 54.74 | 55.7 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 53.02 | 55.41 |
| AT1G33040.1 | Thale cress | cytosol, nucleus, plastid | 49.57 | 55.02 |
| EER95617 | Sorghum | cytosol | 51.29 | 52.65 |
| GSMUA_Achr11P... | Banana | cytosol | 32.33 | 45.45 |
| Os07t0407300-00 | Rice | cytosol, nucleus, plastid | 23.28 | 44.26 |
| HORVU3Hr1G102230.1 | Barley | nucleus | 14.66 | 34.34 |
| Os01t0698900-00 | Rice | plasma membrane | 47.84 | 29.06 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EntrezGene:824109 | UniProt:A0A1I9LR04 | ProteinID:ANM65012.1 |
| ArrayExpress:AT3G49470 | EnsemblPlantsGene:AT3G49470 | RefSeq:AT3G49470 | TAIR:AT3G49470 | RefSeq:AT3G49470-TAIR-G | EnsemblPlants:AT3G49470.2 |
| Unigene:At.1027 | ncoils:Coil | InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005854 | InterPro:IPR002715 | InterPro:IPR038187 | Symbol:NACA2 | InterPro:NAC_A/B_dom_sf |
| RefSeq:NP_001327011.1 | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 |
| SMART:SM01407 | UniParc:UPI0008491F14 | SEG:seg | : | : | : |
Description
NACA2Nascent polypeptide-associated complex subunit alpha-like protein 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR04]
Coordinates
chr3:+:18340976..18342644
Molecular Weight (calculated)
25400.3 Da
IEP (calculated)
4.197
GRAVY (calculated)
-0.715
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPPPAVVTE SADGQPEQPP VTAIAEELEK KLQTDEPIVE DVKDDEDDDD DDEEEEDDDA QGVSGSSKQS RSEKKSRKAM LKLGMKPVTG VSRVTIKRTK
101: NVLFFISKPD VFKSPHSETY VIFGEAKIED LSSQLQTQAA QQFRMPEIGA TSQRAEASTA TVEAQVEEDE EEIDETGVEA RDIDLVMTQA GVSRSKAVKA
201: LKSHDGDIRT EAQTLESYAL ILTPPSSVSL HH
101: NVLFFISKPD VFKSPHSETY VIFGEAKIED LSSQLQTQAA QQFRMPEIGA TSQRAEASTA TVEAQVEEDE EEIDETGVEA RDIDLVMTQA GVSRSKAVKA
201: LKSHDGDIRT EAQTLESYAL ILTPPSSVSL HH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.