Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 56.11 | 90.51 |
| TraesCS4B01G347400.1 | Wheat | nucleus | 76.02 | 76.36 |
| TraesCS5A01G516100.1 | Wheat | nucleus | 75.57 | 75.23 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 74.66 | 74.32 |
| Zm00001d048479_P002 | Maize | plastid | 75.57 | 73.25 |
| EER95617 | Sorghum | cytosol | 74.66 | 73.01 |
| Os07t0407300-00 | Rice | cytosol, nucleus, plastid | 40.27 | 72.95 |
| CDY31855 | Canola | cytosol | 43.44 | 70.07 |
| Solyc03g080160.2.1 | Tomato | nucleus | 63.35 | 68.63 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 65.16 | 68.57 |
| KRH64284 | Soybean | endoplasmic reticulum | 63.8 | 64.68 |
| KRH64285 | Soybean | endoplasmic reticulum | 65.16 | 64.57 |
| PGSC0003DMT400001566 | Potato | cytosol | 59.28 | 64.22 |
| KRH53644 | Soybean | endoplasmic reticulum | 64.71 | 64.13 |
| GSMUA_Achr1P06350_001 | Banana | cytosol | 61.54 | 63.55 |
| Os05t0373700-01 | Rice | extracellular, golgi, plasma membrane, plastid | 58.82 | 63.41 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 59.73 | 63.16 |
| Os01t0938900-02 | Rice | nucleus | 57.01 | 62.38 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 57.47 | 62.25 |
| KRH53645 | Soybean | endoplasmic reticulum | 62.9 | 61.78 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 57.92 | 61.54 |
| Bra000711.1-P | Field mustard | cytosol, nucleus, plastid | 57.92 | 61.54 |
| CDX86860 | Canola | cytosol | 58.82 | 61.32 |
| Bra037920.1-P | Field mustard | cytosol | 58.82 | 61.32 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 56.56 | 60.68 |
| Bra012259.1-P | Field mustard | cytosol | 51.58 | 59.38 |
| AT3G49470.2 | Thale cress | cytosol | 56.56 | 53.88 |
| GSMUA_Achr5P20310_001 | Banana | mitochondrion | 46.61 | 52.02 |
| CDX99543 | Canola | nucleus | 40.72 | 50.0 |
| Os01t0698900-00 | Rice | plasma membrane | 76.02 | 43.98 |
| CDY54248 | Canola | cytosol | 42.99 | 42.79 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EntrezGene:4331439 | ProteinID:AAM52321.1 | ProteinID:ABF93700.1 |
| EMBL:AK099300 | EMBL:AY224519 | ProteinID:BAF10709.1 | ProteinID:BAS82034.1 | ProteinID:EEE58236.1 | InterPro:EGD2/NACA |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | InterPro:IPR002715 |
| InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | EnsemblPlantsGene:Os03g0121700 | EnsemblPlants:Os03t0121700-01 | PFAM:PF01849 |
| PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 | UniProt:Q8LMR3 | SMART:SM01407 |
| UniParc:UPI000005F8F3 | RefSeq:XP_015631186.1 | SEG:seg | : | : | : |
Description
Similar to Nascent polypeptide-associated complex alpha subunit-like protein 3 (NAC-alpha-like protein 3) (Alpha-NAC-like protein 3). (Os03t0121700-01)
Coordinates
chr3:+:1194347..1195744
Molecular Weight (calculated)
23725.3 Da
IEP (calculated)
4.039
GRAVY (calculated)
-0.663
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSEQTAPVA TAEAELESSA APPVKPDEAA AKAQPEDDAP VVEDAKDDDD DEEDDDDDED EDEDGEQGAI GNEGSKQSRS EKKSRKAMMK LGMKPVTGVS
101: RITIKRAKNI LFVVSKPDVF KSPTSETYVI FGEAKIEDLS SQLQAQAAQQ FRMQDLSKVM SKPDAAAAAP ADEEEEVDET GIEPRDIDLV MTQASVSRAK
201: AVKALKAHDG DIVSAIMELT A
101: RITIKRAKNI LFVVSKPDVF KSPTSETYVI FGEAKIEDLS SQLQAQAAQQ FRMQDLSKVM SKPDAAAAAP ADEEEEVDET GIEPRDIDLV MTQASVSRAK
201: AVKALKAHDG DIVSAIMELT A
001: MSPPPAVVTE SADGQPEQPP VTAIAEELEK KLQTDEPIVE DVKDDEDDDD DDEEEEDDDA QGVSGSSKQS RSEKKSRKAM LKLGMKPVTG VSRVTIKRTK
101: NVLFFISKPD VFKSPHSETY VIFGEAKIED LSSQLQTQAA QQFRMPEIGA TSQRAEASTA TVEAQVEEDE EEIDETGVEA RDIDLVMTQA GVSRSKAVKA
201: LKSHDGDIVS AIMELTT
101: NVLFFISKPD VFKSPHSETY VIFGEAKIED LSSQLQTQAA QQFRMPEIGA TSQRAEASTA TVEAQVEEDE EEIDETGVEA RDIDLVMTQA GVSRSKAVKA
201: LKSHDGDIVS AIMELTT
Arabidopsis Description
NACA2Nascent polypeptide-associated complex subunit alpha-like protein 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.