Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G10480.1 | CDY27340 | AT2G42395.1 | 21798944 |
| AT4G10480.1 | CDY27341 | AT2G42395.1 | 21798944 |
| AT4G10480.1 | CDY37080 | AT2G42395.1 | 21798944 |
| AT4G10480.1 | CDY37081 | AT2G42395.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037920.1-P | Field mustard | cytosol | 98.58 | 98.58 |
| CDY31855 | Canola | cytosol | 57.08 | 88.32 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 85.38 | 87.02 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 81.6 | 84.8 |
| AT4G10480.1 | Thale cress | cytosol | 81.6 | 81.6 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 80.19 | 81.34 |
| CDX99543 | Canola | nucleus | 68.87 | 81.11 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 78.3 | 80.58 |
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 45.75 | 70.8 |
| Solyc03g080160.2.1 | Tomato | nucleus | 63.68 | 66.18 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 65.09 | 65.71 |
| PGSC0003DMT400001566 | Potato | cytosol | 59.91 | 62.25 |
| GSMUA_Achr1P06350_001 | Banana | cytosol | 62.26 | 61.68 |
| CDX69622 | Canola | cytosol | 58.49 | 60.19 |
| KRH64284 | Soybean | endoplasmic reticulum | 61.79 | 60.09 |
| CDY71160 | Canola | nucleus | 57.08 | 59.9 |
| CDY00769 | Canola | cytosol | 56.6 | 59.7 |
| CDX73823 | Canola | cytosol | 56.6 | 59.7 |
| CDY09831 | Canola | nucleus | 57.55 | 59.22 |
| CDY50549 | Canola | nucleus | 56.13 | 58.91 |
| Os03t0121700-01 | Rice | plasma membrane | 61.32 | 58.82 |
| KRH64285 | Soybean | endoplasmic reticulum | 61.79 | 58.74 |
| KRH53644 | Soybean | endoplasmic reticulum | 61.32 | 58.3 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 59.91 | 57.21 |
| CDY42148 | Canola | nucleus | 54.72 | 57.14 |
| CDY08433 | Canola | plasma membrane | 54.72 | 56.86 |
| TraesCS5A01G516100.1 | Wheat | nucleus | 59.43 | 56.76 |
| TraesCS4B01G347400.1 | Wheat | nucleus | 58.49 | 56.36 |
| Zm00001d048479_P002 | Maize | plastid | 60.38 | 56.14 |
| KRH53645 | Soybean | endoplasmic reticulum | 59.43 | 56.0 |
| EER95617 | Sorghum | cytosol | 58.96 | 55.31 |
| GSMUA_Achr5P20310_001 | Banana | mitochondrion | 43.87 | 46.97 |
| Os07t0407300-00 | Rice | cytosol, nucleus, plastid | 25.47 | 44.26 |
| GSMUA_Achr11P... | Banana | cytosol | 31.6 | 40.61 |
| CDY54248 | Canola | cytosol | 41.98 | 40.09 |
| HORVU3Hr1G102230.1 | Barley | nucleus | 16.04 | 34.34 |
| Os01t0698900-00 | Rice | plasma membrane | 50.94 | 28.27 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EnsemblPlants:CDX86860 | ProteinID:CDX86860 | ProteinID:CDX86860.1 |
| InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 |
| EnsemblPlantsGene:GSBRNA2T00145620001 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 |
| PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 | SMART:SM01407 | UniParc:UPI0004EEC99E |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g22500D
Coordinates
chrLK031847:+:1349904..1351080
Molecular Weight (calculated)
23174.0 Da
IEP (calculated)
3.998
GRAVY (calculated)
-0.598
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGPVIEEVN IEEQLMDAIK EQMKLQNDDG VVVEDVKDGE EEDDIDDDED DNVDGAGENE SSKQSRSEKK SRKAMLKLGM KPVTDVSRVT IKRSKNVLFV
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNA DASEAVTVAQ EEEDDDDVDE TGVEAKDIDL VMTQAGVSKA KAVKALKTND
201: GDIVSAIMEL TT
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNA DASEAVTVAQ EEEDDDDVDE TGVEAKDIDL VMTQAGVSKA KAVKALKTND
201: GDIVSAIMEL TT
001: MPGPVIEEVN EEALMDAIKE QMKLQKENDV VVEDVKDGDE DDDDVDDDDD EIADGAGENE ASKQSRSEKK SRKAMLKLGM KPVTDVSRVT IKRSKNVLFV
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNT DGSEAATVAQ EEEDDEDVDE TGVEAKDIDL VMTQAGVSRP KAVKALKESN
201: GDIVSAIMEL TT
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNT DGSEAATVAQ EEEDDEDVDE TGVEAKDIDL VMTQAGVSRP KAVKALKESN
201: GDIVSAIMEL TT
Arabidopsis Description
Putative alpha NAC [Source:UniProtKB/TrEMBL;Acc:Q0WWN5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.