Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037920.1-P | Field mustard | cytosol | 81.6 | 81.6 |
| CDX86860 | Canola | cytosol | 81.6 | 81.6 |
| AT1G33040.1 | Thale cress | cytosol, nucleus, plastid | 69.34 | 70.33 |
| AT3G12390.1 | Thale cress | cytosol | 61.32 | 64.04 |
| AT5G13850.1 | Thale cress | cytosol | 59.91 | 62.25 |
| AT3G49470.2 | Thale cress | cytosol | 58.02 | 53.02 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EntrezGene:826640 | UniProt:A0A178V0D1 | ProteinID:AAD03429.1 |
| ProteinID:AEE82888.1 | ProteinID:AEE82889.1 | EMBL:AK226309 | ArrayExpress:AT4G10480 | EnsemblPlantsGene:AT4G10480 | RefSeq:AT4G10480 |
| TAIR:AT4G10480 | RefSeq:AT4G10480-TAIR-G | EnsemblPlants:AT4G10480.1 | TAIR:AT4G10480.1 | EMBL:AY045811 | EMBL:AY062724 |
| EMBL:AY096615 | EMBL:AY114656 | Unigene:At.3023 | ProteinID:CAB40041.1 | ProteinID:CAB78171.1 | InterPro:EGD2/NACA |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | RefSeq:NP_001078369.1 |
| RefSeq:NP_192786.1 | InterPro:Nas_poly-pep-assoc_cplx_dom | ProteinID:OAO99203.1 | PFAM:PF01849 | PIRSF:PIRSF015901 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 |
| UniProt:Q0WWN5 | UniProt:Q9SZY1 | SMART:SM01407 | UniParc:UPI000009D99D | SEG:seg | : |
Description
Putative alpha NAC [Source:UniProtKB/TrEMBL;Acc:Q0WWN5]
Coordinates
chr4:-:6477876..6479171
Molecular Weight (calculated)
23173.0 Da
IEP (calculated)
4.017
GRAVY (calculated)
-0.642
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGPVIEEVN EEALMDAIKE QMKLQKENDV VVEDVKDGDE DDDDVDDDDD EIADGAGENE ASKQSRSEKK SRKAMLKLGM KPVTDVSRVT IKRSKNVLFV
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNT DGSEAATVAQ EEEDDEDVDE TGVEAKDIDL VMTQAGVSRP KAVKALKESN
201: GDIVSAIMEL TT
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNT DGSEAATVAQ EEEDDEDVDE TGVEAKDIDL VMTQAGVSRP KAVKALKESN
201: GDIVSAIMEL TT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.