Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50549 | Canola | nucleus | 86.7 | 87.13 |
| CDY71160 | Canola | nucleus | 86.7 | 87.13 |
| CDX73823 | Canola | cytosol | 85.71 | 86.57 |
| CDY00769 | Canola | cytosol | 85.71 | 86.57 |
| Bra034757.1-P | Field mustard | cytosol | 86.21 | 85.78 |
| CDY08433 | Canola | plasma membrane | 86.21 | 85.78 |
| CDY42148 | Canola | nucleus | 84.73 | 84.73 |
| AT5G13850.1 | Thale cress | cytosol | 84.73 | 84.31 |
| Bra001450.1-P | Field mustard | cytosol | 76.85 | 82.54 |
| Bra038716.1-P | Field mustard | cytosol | 53.69 | 81.95 |
| Solyc10g078150.1.1 | Tomato | nucleus | 77.34 | 79.29 |
| KRG95031 | Soybean | endoplasmic reticulum | 78.82 | 79.21 |
| GSMUA_Achr10P... | Banana | nucleus | 77.34 | 78.5 |
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 77.34 | 78.5 |
| PGSC0003DMT400018552 | Potato | nucleus | 75.86 | 77.78 |
| Solyc10g081030.1.1 | Tomato | nucleus | 75.86 | 77.39 |
| KRH66664 | Soybean | endoplasmic reticulum | 76.85 | 76.85 |
| TraesCS1D01G236500.1 | Wheat | cytosol | 77.34 | 76.59 |
| VIT_13s0067g00710.t01 | Wine grape | nucleus | 75.86 | 76.24 |
| HORVU1Hr1G057970.2 | Barley | nucleus | 78.33 | 76.08 |
| KRH66666 | Soybean | endoplasmic reticulum | 73.89 | 75.76 |
| Os01t0938900-02 | Rice | nucleus | 75.37 | 75.74 |
| TraesCS1B01G248000.1 | Wheat | golgi, plastid, unclear | 76.35 | 75.61 |
| KRG95032 | Soybean | nucleus | 76.35 | 75.61 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 74.38 | 74.75 |
| Os05t0373700-01 | Rice | extracellular, golgi, plasma membrane, plastid | 74.38 | 73.66 |
| PGSC0003DMT400072220 | Potato | cytosol, endoplasmic reticulum, nucleus | 70.94 | 72.0 |
| EES15306 | Sorghum | nucleus | 72.91 | 71.5 |
| TraesCS4D01G164400.1 | Wheat | nucleus | 72.91 | 71.5 |
| Zm00001d047477_P001 | Maize | plastid | 70.94 | 70.94 |
| TraesCS4A01G138000.1 | Wheat | plastid, unclear | 72.41 | 70.67 |
| TraesCS4B01G154200.1 | Wheat | nucleus | 70.94 | 69.9 |
| EER94856 | Sorghum | nucleus | 70.94 | 69.57 |
| Zm00001d029173_P004 | Maize | nucleus | 70.44 | 69.08 |
| Zm00001d049830_P002 | Maize | extracellular | 70.44 | 68.75 |
| TraesCS3A01G474200.1 | Wheat | nucleus | 67.0 | 68.69 |
| TraesCS3A01G474500.1 | Wheat | nucleus | 63.55 | 67.89 |
| TraesCS3B01G518300.1 | Wheat | cytosol, nucleus, plastid | 66.01 | 67.34 |
| TraesCS3B01G518000.1 | Wheat | cytosol, nucleus, plastid | 66.01 | 66.01 |
| TraesCS3B01G518200.1 | Wheat | cytosol | 42.36 | 65.15 |
| TraesCS3D01G470600.2 | Wheat | cytosol | 61.58 | 65.1 |
| TraesCS3D01G470500.1 | Wheat | cytosol, nucleus, plastid | 59.61 | 64.36 |
| TraesCS3B01G517400.1 | Wheat | cytosol | 62.07 | 63.32 |
| HORVU3Hr1G102520.6 | Barley | cytosol, nucleus | 64.53 | 63.28 |
| TraesCS3A01G474600.1 | Wheat | cytosol | 61.58 | 62.81 |
| TraesCSU01G140100.1 | Wheat | nucleus | 61.58 | 62.81 |
| GSMUA_Achr5P17540_001 | Banana | endoplasmic reticulum, extracellular, golgi | 72.91 | 61.92 |
| AT4G10480.1 | Thale cress | cytosol | 64.04 | 61.32 |
| HORVU2Hr1G015260.1 | Barley | cytosol, nucleus, plastid | 60.59 | 60.89 |
| TraesCS3B01G518400.1 | Wheat | cytosol | 57.64 | 59.69 |
| TraesCS3A01G474800.1 | Wheat | cytosol, nucleus, plastid | 57.64 | 57.92 |
| TraesCSU01G140000.1 | Wheat | nucleus | 56.65 | 56.65 |
| AT1G33040.1 | Thale cress | cytosol, nucleus, plastid | 55.17 | 53.59 |
| AT3G49470.2 | Thale cress | cytosol | 61.08 | 53.45 |
| TraesCS3B01G517500.1 | Wheat | cytosol, golgi, nucleus | 52.22 | 47.11 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EntrezGene:820418 | UniProt:A0A178VJD9 | ProteinID:AAG51031.1 |
| ProteinID:AEE75192.1 | ArrayExpress:AT3G12390 | EnsemblPlantsGene:AT3G12390 | RefSeq:AT3G12390 | TAIR:AT3G12390 | RefSeq:AT3G12390-TAIR-G |
| EnsemblPlants:AT3G12390.1 | TAIR:AT3G12390.1 | EMBL:AY048232 | EMBL:AY094022 | Unigene:At.23572 | ProteinID:BAB03146.1 |
| InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0005854 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009506 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0015031 | GO:GO:0022626 | InterPro:IPR002715 | InterPro:IPR038187 |
| InterPro:NAC_A/B_dom_sf | RefSeq:NP_187845.1 | InterPro:Nas_poly-pep-assoc_cplx_dom | ProteinID:OAP05864.1 | PFAM:PF01849 | PIRSF:PIRSF015901 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF16 | UniProt:Q9LHG9 | SMART:SM01407 |
| UniParc:UPI00000A4103 | SEG:seg | : | : | : | : |
Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
Coordinates
chr3:+:3942257..3943809
Molecular Weight (calculated)
21983.4 Da
IEP (calculated)
4.067
GRAVY (calculated)
-0.706
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.