Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G236500.1 | Wheat | cytosol | 92.34 | 94.15 |
| TraesCS1B01G248000.1 | Wheat | golgi, plastid, unclear | 91.87 | 93.66 |
| GSMUA_Achr10P... | Banana | nucleus | 78.47 | 82.0 |
| VIT_13s0067g00710.t01 | Wine grape | nucleus | 77.99 | 80.69 |
| Os05t0373700-01 | Rice | extracellular, golgi, plasma membrane, plastid | 78.47 | 80.0 |
| KRG95031 | Soybean | endoplasmic reticulum | 77.03 | 79.7 |
| Solyc10g081030.1.1 | Tomato | nucleus | 75.6 | 79.4 |
| Solyc10g078150.1.1 | Tomato | nucleus | 75.12 | 79.29 |
| KRH66666 | Soybean | endoplasmic reticulum | 75.12 | 79.29 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 76.56 | 79.21 |
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 75.6 | 79.0 |
| KRH66664 | Soybean | endoplasmic reticulum | 76.56 | 78.82 |
| AT3G12390.1 | Thale cress | cytosol | 76.08 | 78.33 |
| CDY71160 | Canola | nucleus | 75.6 | 78.22 |
| PGSC0003DMT400018552 | Potato | nucleus | 73.68 | 77.78 |
| CDY50549 | Canola | nucleus | 75.12 | 77.72 |
| Bra038716.1-P | Field mustard | cytosol | 49.28 | 77.44 |
| KRG95032 | Soybean | nucleus | 75.12 | 76.59 |
| AT5G13850.1 | Thale cress | cytosol | 72.73 | 74.51 |
| CDY00769 | Canola | cytosol | 71.29 | 74.13 |
| CDX73823 | Canola | cytosol | 71.29 | 74.13 |
| Bra001450.1-P | Field mustard | cytosol | 66.51 | 73.55 |
| PGSC0003DMT400072220 | Potato | cytosol, endoplasmic reticulum, nucleus | 69.86 | 73.0 |
| CDY08433 | Canola | plasma membrane | 70.81 | 72.55 |
| Bra034757.1-P | Field mustard | cytosol | 70.81 | 72.55 |
| CDY42148 | Canola | nucleus | 69.38 | 71.43 |
| CDY09831 | Canola | nucleus | 70.33 | 71.36 |
| CDX69622 | Canola | cytosol | 69.86 | 70.87 |
| Bra008797.1-P | Field mustard | cytosol | 69.86 | 70.19 |
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 44.98 | 68.61 |
| HORVU3Hr1G102520.6 | Barley | cytosol, nucleus | 66.99 | 67.63 |
| HORVU3Hr1G102310.1 | Barley | cytosol | 19.14 | 64.52 |
| GSMUA_Achr5P17540_001 | Banana | endoplasmic reticulum, extracellular, golgi | 71.29 | 62.34 |
| HORVU2Hr1G015260.1 | Barley | cytosol, nucleus, plastid | 59.81 | 61.88 |
| HORVU3Hr1G102230.1 | Barley | nucleus | 17.22 | 36.36 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | EnsemblPlantsGene:HORVU1Hr1G057970 | EnsemblPlants:HORVU1Hr1G057970.2 | InterPro:IPR002715 |
| InterPro:IPR038187 | UniProt:M0YAP1 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 | PIRSF:PIRSF015901 |
| PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF16 | SMART:SM01407 | UniParc:UPI0002965970 | SEG:seg |
Description
No Description!
Coordinates
chrchr1H:-:422891853..422894245
Molecular Weight (calculated)
22623.0 Da
IEP (calculated)
4.006
GRAVY (calculated)
-0.675
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAETATATQ EELLHAVLEE QKLAAQVQGD EPVVEDDDDE EEEDDDDEDD KDDDAEGVDA SGRSKQSRSE KKSRKAMLKL GMKTITGVSR VTVKKSKNIL
101: FVISKPDVFK SPASDTYVIF GEAKIEDLSS QLQSQAAEQF KAPDLSSVIS NPEASTAAQE DDEDCDETGV EPKDIELVMT QAGVPRPKAV KALKSADGDI
201: VSAIMELTN
101: FVISKPDVFK SPASDTYVIF GEAKIEDLSS QLQSQAAEQF KAPDLSSVIS NPEASTAAQE DDEDCDETGV EPKDIELVMT QAGVPRPKAV KALKSADGDI
201: VSAIMELTN
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.