Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G102310.1 | Barley | cytosol | 31.31 | 50.0 |
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 39.39 | 28.47 |
| CDY31855 | Canola | cytosol | 37.37 | 27.01 |
| HORVU3Hr1G102520.6 | Barley | cytosol, nucleus | 43.43 | 20.77 |
| HORVU2Hr1G015260.1 | Barley | cytosol, nucleus, plastid | 41.41 | 20.3 |
| Bra012259.1-P | Field mustard | cytosol | 37.37 | 19.27 |
| KRH53645 | Soybean | endoplasmic reticulum | 42.42 | 18.67 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 39.39 | 18.66 |
| Solyc03g080160.2.1 | Tomato | nucleus | 38.38 | 18.63 |
| PGSC0003DMT400001566 | Potato | cytosol | 38.38 | 18.63 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 38.38 | 18.63 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 39.39 | 18.57 |
| KRH64284 | Soybean | endoplasmic reticulum | 40.4 | 18.35 |
| Bra000711.1-P | Field mustard | cytosol, nucleus, plastid | 38.38 | 18.27 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 38.38 | 18.27 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 37.37 | 17.96 |
| KRH53644 | Soybean | endoplasmic reticulum | 39.39 | 17.49 |
| KRH64285 | Soybean | endoplasmic reticulum | 39.39 | 17.49 |
| HORVU1Hr1G057970.2 | Barley | nucleus | 36.36 | 17.22 |
| CDX86860 | Canola | cytosol | 34.34 | 16.04 |
| Bra037920.1-P | Field mustard | cytosol | 33.33 | 15.57 |
| AT3G49470.2 | Thale cress | cytosol | 34.34 | 14.66 |
| GSMUA_Achr11P... | Banana | cytosol | 22.22 | 13.33 |
| CDY54248 | Canola | cytosol | 25.25 | 11.26 |
| CDX99543 | Canola | nucleus | 15.15 | 8.33 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G102230.1 | EnsemblPlantsGene:HORVU3Hr1G102230 | Gene3D:1.10.8.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005854 | InterPro:EGD2/NACA | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF16 | UniParc:UPI000B462E39 |
| UniProt:A0A287MI49 | MapMan:19.1.2.1.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:664731678..664734057
Molecular Weight (calculated)
10757.6 Da
IEP (calculated)
4.083
GRAVY (calculated)
-0.387
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MFEGAKIEDV SNQLWTKQQS NSRCLDQVAS SQGHPFLPLA QDNEEVDGIS DEKNHVELMM TQASISRSKA CKGLTAEDGD IVGAIMDLTN EVLEGGFIS
001: MSPPPAVVTE SADGQPEQPP VTAIAEELEK KLQTDEPIVE DVKDDEDDDD DDEEEEDDDA QGVSGSSKQS RSEKKSRKAM LKLGMKPVTG VSRVTIKRTK
101: NVLFFISKPD VFKSPHSETY VIFGEAKIED LSSQLQTQAA QQFRMPEIGA TSQRAEASTA TVEAQVEEDE EEIDETGVEA RDIDLVMTQA GVSRSKAVKA
201: LKSHDGDIVS AIMELTT
101: NVLFFISKPD VFKSPHSETY VIFGEAKIED LSSQLQTQAA QQFRMPEIGA TSQRAEASTA TVEAQVEEDE EEIDETGVEA RDIDLVMTQA GVSRSKAVKA
201: LKSHDGDIVS AIMELTT
Arabidopsis Description
NACA2Nascent polypeptide-associated complex subunit alpha-like protein 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.