Factsheet for Bra012259.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31855	Canola	cytosol	70.31	98.54
CDY01344	Canola	cytosol, nucleus, plastid	89.06	83.01
Bra000711.1-P	Field mustard	cytosol, nucleus, plastid	84.38	77.88
HORVU4Hr1G084900.2	Barley	mitochondrion	50.52	70.8
Bra037920.1-P	Field mustard	cytosol	78.12	70.75
AT1G33040.1	Thale cress	cytosol, nucleus, plastid	71.88	66.03
Bra001450.1-P	Field mustard	cytosol	59.38	60.32
Solyc03g080160.2.1	Tomato	nucleus	63.02	59.31
GSMUA_Achr1P06350_001	Banana	cytosol	64.58	57.94
Bra038716.1-P	Field mustard	cytosol	40.1	57.89
PGSC0003DMT400001566	Potato	cytosol	60.42	56.86
VIT_16s0098g00830.t01	Wine grape	cytosol, nucleus, plastid	60.42	55.24
Bra008797.1-P	Field mustard	cytosol	59.38	54.81
KRH64284	Soybean	endoplasmic reticulum	61.98	54.59
Bra034757.1-P	Field mustard	cytosol	57.29	53.92
KRH53644	Soybean	endoplasmic reticulum	61.46	52.91
TraesCS4D01G342400.1	Wheat	nucleus	60.94	52.7
KRH64285	Soybean	endoplasmic reticulum	60.94	52.47
TraesCS4B01G347400.1	Wheat	nucleus	59.9	52.27
Os03t0121700-01	Rice	plasma membrane	59.38	51.58
TraesCS5A01G516100.1	Wheat	nucleus	59.38	51.35
KRH53645	Soybean	endoplasmic reticulum	59.9	51.11
Zm00001d048479_P002	Maize	plastid	58.85	49.56
EER95617	Sorghum	cytosol	57.81	49.12
GSMUA_Achr5P20310_001	Banana	mitochondrion	45.83	44.44
GSMUA_Achr11P...	Banana	cytosol	33.33	38.79
HORVU3Hr1G102230.1	Barley	nucleus	19.27	37.37
Os07t0407300-00	Rice	cytosol, nucleus, plastid	19.79	31.15
Os01t0698900-00	Rice	plasma membrane	47.92	24.08

Protein Annotations

Gene3D:1.10.8.10	MapMan:19.1.2.1.1	Gene3D:2.20.70.30	EnsemblPlantsGene:Bra012259	EnsemblPlants:Bra012259.1	EnsemblPlants:Bra012259.1-P
InterPro:EGD2/NACA	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005854
InterPro:IPR002715	InterPro:IPR038187	UniProt:M4D6Z9	InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	PFAM:PF01849
PIRSF:PIRSF015901	PFscan:PS51151	PANTHER:PTHR21713	PANTHER:PTHR21713:SF7	SMART:SM01407	UniParc:UPI000254157E
SEG:seg	:	:	:	:	:

Description

AT4G10480 (E=1e-055) | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative

Coordinates

chrA07:+:9028962..9029884

Molecular Weight (calculated)

20848.0 Da

IEP (calculated)

4.753

GRAVY (calculated)

-0.352

Length

192 amino acids

Sequence
(BLAST)

001: MPGPVVEEVK IEEAIKEQMK LEVRFPSLPL SFVSIRGQGA ESGKQSRSEK KSRKAMLKLG MKPVTDVSRV TIKRSKNVLF VISKPDVFKS PNSETYVIFG
101: EAKIDDMSSQ LQAQAAQRFK MPDVASMIPP SAEAAAVAQE EDDDDDDVDE TGVEAKDVEL VMTQAGVSKA KATKALKAND GDIVSAIMEL TT

Best Arabidopsis Sequence Match ( AT4G10480.1 )
(BLAST)

001: MPGPVIEEVN EEALMDAIKE QMKLQKENDV VVEDVKDGDE DDDDVDDDDD EIADGAGENE ASKQSRSEKK SRKAMLKLGM KPVTDVSRVT IKRSKNVLFV
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNT DGSEAATVAQ EEEDDEDVDE TGVEAKDIDL VMTQAGVSRP KAVKALKESN
201: GDIVSAIMEL TT

Arabidopsis Description

Putative alpha NAC [Source:UniProtKB/TrEMBL;Acc:Q0WWN5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.