Factsheet for GSMUA_Achr5P20310_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G084900.2	Barley	mitochondrion	50.51	72.99
CDY31855	Canola	cytosol	44.44	64.23
GSMUA_Achr1P06350_001	Banana	cytosol	52.53	48.6
Os03t0121700-01	Rice	plasma membrane	52.02	46.61
GSMUA_Achr10P...	Banana	nucleus	46.97	46.5
GSMUA_Achr1P11330_001	Banana	plasma membrane	46.46	46.0
Bra012259.1-P	Field mustard	cytosol	44.44	45.83
TraesCS4B01G347400.1	Wheat	nucleus	50.51	45.45
EER95617	Sorghum	cytosol	51.52	45.13
TraesCS5A01G516100.1	Wheat	nucleus	50.51	45.05
TraesCS4D01G342400.1	Wheat	nucleus	50.51	45.05
Zm00001d048479_P002	Maize	plastid	51.52	44.74
CDX86860	Canola	cytosol	46.97	43.87
Bra037920.1-P	Field mustard	cytosol	46.97	43.87
CDY05102	Canola	cytosol, nucleus, plastid	44.95	43.63
GSMUA_Achr11P...	Banana	cytosol	35.86	43.03
CDX90758	Canola	cytosol, nucleus, plastid	44.95	42.79
Bra000711.1-P	Field mustard	cytosol, nucleus, plastid	44.95	42.79
CDY01344	Canola	cytosol, nucleus, plastid	44.44	42.72
CDY31852	Canola	cytosol, nucleus, plastid	44.95	42.58
GSMUA_Achr5P17540_001	Banana	endoplasmic reticulum, extracellular, golgi	47.47	39.33
CDX99543	Canola	nucleus	28.28	31.11
CDY54248	Canola	cytosol	34.85	31.08
Os01t0698900-00	Rice	plasma membrane	40.4	20.94
Os07t0407300-00	Rice	cytosol, nucleus, plastid	9.09	14.75

Protein Annotations

Gene3D:1.10.8.10	MapMan:19.1.2.1.1	Gene3D:2.20.70.30	InterPro:EGD2/NACA	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005854	EnsemblPlantsGene:GSMUA_Achr5G20310_001	EnsemblPlants:GSMUA_Achr5P20310_001	EnsemblPlants:GSMUA_Achr5T20310_001
InterPro:IPR002715	InterPro:IPR038187	UniProt:M0T060	InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	PFAM:PF01849
PIRSF:PIRSF015901	PFscan:PS51151	PANTHER:PTHR21713	PANTHER:PTHR21713:SF7	SMART:SM01407	UniParc:UPI00029678BD
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G20310_001]

Coordinates

chr5:-:22067853..22069046

Molecular Weight (calculated)

22462.2 Da

IEP (calculated)

6.778

GRAVY (calculated)

0.005

Length

198 amino acids

Sequence
(BLAST)

001: MKPVTGVSRV TIKRNKNILF VISKPDVFKS PNSDTYVIFG EAKIEDLSSH LQTQAAQQFR IPDLSNKMAK VDVSSSATTG GEEEEVDESG LEPRDIDLVM
101: TQAGVSRAKA VKALKTNNGD IVSAIMELTA YDQCFVFLRD VHFFVMLKLI YFFCYATEHF TDNMPVNFEQ SFLVLNYVKK LKLFFFSQSI CRIWMIAN

Best Arabidopsis Sequence Match ( AT3G49470.1 )
(BLAST)

001: MSPPPAVVTE SADGQPEQPP VTAIAEELEK KLQTDEPIVE DVKDDEDDDD DDEEEEDDDA QGVSGSSKQS RSEKKSRKAM LKLGMKPVTG VSRVTIKRTK
101: NVLFFISKPD VFKSPHSETY VIFGEAKIED LSSQLQTQAA QQFRMPEIGA TSQRAEASTA TVEAQVEEDE EEIDETGVEA RDIDLVMTQA GVSRSKAVKA
201: LKSHDGDIVS AIMELTT

Arabidopsis Description

NACA2Nascent polypeptide-associated complex subunit alpha-like protein 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR04]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.