Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31855 | Canola | cytosol | 61.72 | 94.16 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 88.52 | 89.81 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 87.56 | 89.71 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 89.0 | 89.42 |
| CDX86860 | Canola | cytosol | 81.34 | 80.19 |
| AT1G33040.1 | Thale cress | cytosol, nucleus, plastid | 73.21 | 73.21 |
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 45.93 | 70.07 |
| CDX99543 | Canola | nucleus | 59.33 | 68.89 |
| Solyc03g080160.2.1 | Tomato | nucleus | 66.99 | 68.63 |
| PGSC0003DMT400001566 | Potato | cytosol | 63.16 | 64.71 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 63.64 | 63.33 |
| CDY00769 | Canola | cytosol | 60.29 | 62.69 |
| CDX73823 | Canola | cytosol | 60.29 | 62.69 |
| GSMUA_Achr1P06350_001 | Banana | cytosol | 64.11 | 62.62 |
| CDY42148 | Canola | nucleus | 58.85 | 60.59 |
| CDY50549 | Canola | nucleus | 58.37 | 60.4 |
| CDY71160 | Canola | nucleus | 57.89 | 59.9 |
| CDY08433 | Canola | plasma membrane | 58.37 | 59.8 |
| Os03t0121700-01 | Rice | plasma membrane | 63.16 | 59.73 |
| CDX69622 | Canola | cytosol | 58.85 | 59.71 |
| CDY09831 | Canola | nucleus | 58.85 | 59.71 |
| KRH53644 | Soybean | endoplasmic reticulum | 63.64 | 59.64 |
| KRH64284 | Soybean | endoplasmic reticulum | 62.2 | 59.63 |
| KRH64285 | Soybean | endoplasmic reticulum | 63.16 | 59.19 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 61.72 | 58.11 |
| TraesCS4B01G347400.1 | Wheat | nucleus | 60.77 | 57.73 |
| TraesCS5A01G516100.1 | Wheat | nucleus | 60.77 | 57.21 |
| KRH53645 | Soybean | endoplasmic reticulum | 61.24 | 56.89 |
| EER95617 | Sorghum | cytosol | 61.24 | 56.64 |
| Zm00001d048479_P002 | Maize | plastid | 60.77 | 55.7 |
| GSMUA_Achr5P20310_001 | Banana | mitochondrion | 42.58 | 44.95 |
| Os07t0407300-00 | Rice | cytosol, nucleus, plastid | 25.36 | 43.44 |
| CDY54248 | Canola | cytosol | 43.54 | 40.99 |
| GSMUA_Achr11P... | Banana | cytosol | 31.58 | 40.0 |
| HORVU3Hr1G102230.1 | Barley | nucleus | 18.66 | 39.39 |
| Os01t0698900-00 | Rice | plasma membrane | 52.15 | 28.53 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | UniProt:A0A078H2W3 | EnsemblPlants:CDY31852 | ProteinID:CDY31852 |
| ProteinID:CDY31852.1 | InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005854 | EnsemblPlantsGene:GSBRNA2T00050566001 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom |
| PFAM:PF01849 | PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 | SMART:SM01407 |
| UniParc:UPI0001CAC1F0 | SEG:seg | : | : | : | : |
Description
BnaC07g15020DBnaC07g15020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2W3]
Coordinates
chrLK032281:+:29122..31406
Molecular Weight (calculated)
22786.4 Da
IEP (calculated)
4.005
GRAVY (calculated)
-0.680
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGPVVEEVK IEEAIKEQMK LEKEDDVVVE DVKDGDEDDD VDDDDDDDDN VDGAGDNESS KQSRSEKKSR KAMLKLGMKP VTDVSRVTIK RSKNVLFVIS
101: KPDVFKSPNS ETYVIFGEAK IDDMSSQLQA QAAQRFKMPD VASMIPPNAE AAAVAQEEDE DDDDVDETGV EAKDVELVMT QAGVSKAKAT KALKANDGDI
201: VSAIMELTT
101: KPDVFKSPNS ETYVIFGEAK IDDMSSQLQA QAAQRFKMPD VASMIPPNAE AAAVAQEEDE DDDDVDETGV EAKDVELVMT QAGVSKAKAT KALKANDGDI
201: VSAIMELTT
001: MPGAIVEEEK SQIESIKEQL KLEKEDDVVV EDVKDGEEED DDEDDEDVEV EGEGGNENAK QSRSEKKSRK AVLKLGMKPV SDVSRVTIKR AKNVLFVISK
101: PDVYKSPNAE TYVIFGEAKV DDLSSQLQTQ AAQRFKMPDV TSMLPNAGSE ATMAPLAEEE DEDDVDDTGV EARDIDLVMT QAGVSKAKAV SALKANDGDI
201: VSAIMELTT
101: PDVYKSPNAE TYVIFGEAKV DDLSSQLQTQ AAQRFKMPDV TSMLPNAGSE ATMAPLAEEE DEDDVDDTGV EARDIDLVMT QAGVSKAKAV SALKANDGDI
201: VSAIMELTT
Arabidopsis Description
NACA5Nascent polypeptide-associated complex subunit alpha-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGC6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.