Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000711.1-P | Field mustard | cytosol, nucleus, plastid | 97.55 | 95.67 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 97.55 | 95.67 |
| CDY31855 | Canola | cytosol | 60.78 | 90.51 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 89.71 | 87.56 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 88.24 | 87.38 |
| CDX86860 | Canola | cytosol | 84.8 | 81.6 |
| AT1G33040.1 | Thale cress | cytosol, nucleus, plastid | 75.49 | 73.68 |
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 48.53 | 72.26 |
| CDX99543 | Canola | nucleus | 59.31 | 67.22 |
| Solyc03g080160.2.1 | Tomato | nucleus | 64.71 | 64.71 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 65.2 | 63.33 |
| PGSC0003DMT400001566 | Potato | cytosol | 62.25 | 62.25 |
| GSMUA_Achr1P06350_001 | Banana | cytosol | 64.71 | 61.68 |
| CDY00769 | Canola | cytosol | 60.29 | 61.19 |
| CDX73823 | Canola | cytosol | 60.29 | 61.19 |
| CDY09831 | Canola | nucleus | 60.29 | 59.71 |
| CDY50549 | Canola | nucleus | 58.82 | 59.41 |
| CDY71160 | Canola | nucleus | 58.33 | 58.91 |
| KRH64284 | Soybean | endoplasmic reticulum | 61.76 | 57.8 |
| CDX69622 | Canola | cytosol | 58.33 | 57.77 |
| CDY42148 | Canola | nucleus | 57.35 | 57.64 |
| Os03t0121700-01 | Rice | plasma membrane | 62.25 | 57.47 |
| CDY08433 | Canola | plasma membrane | 57.35 | 57.35 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 62.25 | 57.21 |
| TraesCS5A01G516100.1 | Wheat | nucleus | 61.76 | 56.76 |
| KRH64285 | Soybean | endoplasmic reticulum | 61.76 | 56.5 |
| KRH53644 | Soybean | endoplasmic reticulum | 61.27 | 56.05 |
| TraesCS4B01G347400.1 | Wheat | nucleus | 60.29 | 55.91 |
| EER95617 | Sorghum | cytosol | 59.31 | 53.54 |
| KRH53645 | Soybean | endoplasmic reticulum | 58.82 | 53.33 |
| Zm00001d048479_P002 | Maize | plastid | 58.82 | 52.63 |
| GSMUA_Achr5P20310_001 | Banana | mitochondrion | 43.63 | 44.95 |
| GSMUA_Achr11P... | Banana | cytosol | 33.33 | 41.21 |
| Os07t0407300-00 | Rice | cytosol, nucleus, plastid | 24.02 | 40.16 |
| CDY54248 | Canola | cytosol | 42.65 | 39.19 |
| HORVU3Hr1G102230.1 | Barley | nucleus | 18.63 | 38.38 |
| Os01t0698900-00 | Rice | plasma membrane | 50.49 | 26.96 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EnsemblPlants:CDY05102 | ProteinID:CDY05102 | ProteinID:CDY05102.1 |
| InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 |
| EnsemblPlantsGene:GSBRNA2T00119867001 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 |
| PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 | SMART:SM01407 | UniParc:UPI0004EF049C |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g29000D
Coordinates
chrLK031959:-:654397..655619
Molecular Weight (calculated)
22156.9 Da
IEP (calculated)
4.154
GRAVY (calculated)
-0.556
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGPVVEEVK IEEAIKEQMK LEKEDDVVVE DVKDGDEDVD DDDNVDGAGD NESSKQSRSE KKSRKAMLKL GMKPVTDVSR VTIKRSKNVL FVISKPDVFK
101: SPNSETYVIF GEAKIDDMSS QLQAQAAQRF KMPDVASMIP NSDASEAAAV AQEEDEDDVV DETGVEAKDV ELVMTQAGVS KAKATKALKA NDGDIVSAIM
201: ELTT
101: SPNSETYVIF GEAKIDDMSS QLQAQAAQRF KMPDVASMIP NSDASEAAAV AQEEDEDDVV DETGVEAKDV ELVMTQAGVS KAKATKALKA NDGDIVSAIM
201: ELTT
001: MPGPVIEEVN EEALMDAIKE QMKLQKENDV VVEDVKDGDE DDDDVDDDDD EIADGAGENE ASKQSRSEKK SRKAMLKLGM KPVTDVSRVT IKRSKNVLFV
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNT DGSEAATVAQ EEEDDEDVDE TGVEAKDIDL VMTQAGVSRP KAVKALKESN
201: GDIVSAIMEL TT
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNT DGSEAATVAQ EEEDDEDVDE TGVEAKDIDL VMTQAGVSRP KAVKALKESN
201: GDIVSAIMEL TT
Arabidopsis Description
Putative alpha NAC [Source:UniProtKB/TrEMBL;Acc:Q0WWN5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.