Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31855 | Canola | cytosol | 53.59 | 81.75 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 73.68 | 75.49 |
| Bra000711.1-P | Field mustard | cytosol, nucleus, plastid | 75.12 | 75.48 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 75.12 | 75.48 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 73.68 | 74.76 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 73.21 | 73.21 |
| Bra012259.1-P | Field mustard | cytosol | 66.03 | 71.88 |
| AT4G10480.1 | Thale cress | cytosol | 70.33 | 69.34 |
| CDX99543 | Canola | nucleus | 52.63 | 61.11 |
| AT3G12390.1 | Thale cress | cytosol | 53.59 | 55.17 |
| AT5G13850.1 | Thale cress | cytosol | 53.59 | 54.9 |
| AT3G49470.2 | Thale cress | cytosol | 55.02 | 49.57 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EntrezGene:840199 | ProteinID:AAF31282.1 | ProteinID:AEE31552.1 |
| ArrayExpress:AT1G33040 | EnsemblPlantsGene:AT1G33040 | RefSeq:AT1G33040 | TAIR:AT1G33040 | RefSeq:AT1G33040-TAIR-G | EnsemblPlants:AT1G33040.1 |
| TAIR:AT1G33040.1 | EMBL:AY045682 | EMBL:AY059164 | EMBL:AY084346 | Unigene:At.11961 | ncoils:Coil |
| InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | InterPro:IPR002715 | InterPro:IPR038187 | Symbol:NACA5 |
| InterPro:NAC_A/B_dom_sf | RefSeq:NP_564415.1 | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 | PIRSF:PIRSF015901 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51151 |
| PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 | UniProt:Q8LGC6 | SMART:SM01407 | UniParc:UPI00000A3E4B | SEG:seg |
Description
NACA5Nascent polypeptide-associated complex subunit alpha-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGC6]
Coordinates
chr1:+:11966423..11967843
Molecular Weight (calculated)
22781.4 Da
IEP (calculated)
4.033
GRAVY (calculated)
-0.628
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGAIVEEEK SQIESIKEQL KLEKEDDVVV EDVKDGEEED DDEDDEDVEV EGEGGNENAK QSRSEKKSRK AVLKLGMKPV SDVSRVTIKR AKNVLFVISK
101: PDVYKSPNAE TYVIFGEAKV DDLSSQLQTQ AAQRFKMPDV TSMLPNAGSE ATMAPLAEEE DEDDVDDTGV EARDIDLVMT QAGVSKAKAV SALKANDGDI
201: VSAIMELTT
101: PDVYKSPNAE TYVIFGEAKV DDLSSQLQTQ AAQRFKMPDV TSMLPNAGSE ATMAPLAEEE DEDDVDDTGV EARDIDLVMT QAGVSKAKAV SALKANDGDI
201: VSAIMELTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.