Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86860 | Canola | cytosol | 81.11 | 68.87 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 71.11 | 61.54 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 68.89 | 59.33 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 67.22 | 59.31 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 66.11 | 57.77 |
| CDY31855 | Canola | cytosol | 42.22 | 55.47 |
| AT1G33040.1 | Thale cress | cytosol, nucleus, plastid | 61.11 | 52.63 |
| Solyc03g080160.2.1 | Tomato | nucleus | 52.78 | 46.57 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 53.89 | 46.19 |
| GSMUA_Achr1P06350_001 | Banana | cytosol | 52.22 | 43.93 |
| Os07t0407300-00 | Rice | cytosol, nucleus, plastid | 28.89 | 42.62 |
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 32.22 | 42.34 |
| PGSC0003DMT400001566 | Potato | cytosol | 47.78 | 42.16 |
| CDX69622 | Canola | cytosol | 47.22 | 41.26 |
| CDY71160 | Canola | nucleus | 46.11 | 41.09 |
| CDX73823 | Canola | cytosol | 45.56 | 40.8 |
| CDY00769 | Canola | cytosol | 45.56 | 40.8 |
| Os03t0121700-01 | Rice | plasma membrane | 50.0 | 40.72 |
| CDY09831 | Canola | nucleus | 46.11 | 40.29 |
| CDY50549 | Canola | nucleus | 45.0 | 40.1 |
| Zm00001d048479_P002 | Maize | plastid | 50.56 | 39.91 |
| KRH53644 | Soybean | endoplasmic reticulum | 49.44 | 39.91 |
| KRH64284 | Soybean | endoplasmic reticulum | 48.33 | 39.91 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 48.89 | 39.64 |
| KRH64285 | Soybean | endoplasmic reticulum | 48.89 | 39.46 |
| CDY42148 | Canola | nucleus | 44.44 | 39.41 |
| TraesCS5A01G516100.1 | Wheat | nucleus | 48.33 | 39.19 |
| TraesCS4B01G347400.1 | Wheat | nucleus | 47.78 | 39.09 |
| EER95617 | Sorghum | cytosol | 48.89 | 38.94 |
| CDY08433 | Canola | plasma membrane | 43.89 | 38.73 |
| KRH53645 | Soybean | endoplasmic reticulum | 47.78 | 38.22 |
| CDY54248 | Canola | cytosol | 40.56 | 32.88 |
| GSMUA_Achr5P20310_001 | Banana | mitochondrion | 31.11 | 28.28 |
| GSMUA_Achr11P... | Banana | cytosol | 24.44 | 26.67 |
| Os01t0698900-00 | Rice | plasma membrane | 49.44 | 23.3 |
| HORVU3Hr1G102230.1 | Barley | nucleus | 8.33 | 15.15 |
Protein Annotations
| MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EnsemblPlants:CDX99543 | ProteinID:CDX99543 | ProteinID:CDX99543.1 | ncoils:Coil |
| InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 |
| EnsemblPlantsGene:GSBRNA2T00107981001 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 |
| PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 | SMART:SM01407 | UniParc:UPI0004EEDCD6 | SEG:seg |
Description
BnaC09g24490D
Coordinates
chrLK031911:-:722476..723425
Molecular Weight (calculated)
20520.0 Da
IEP (calculated)
4.984
GRAVY (calculated)
-0.542
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGPVIEEVN TEEQLMDAIK EQMKLQNDND VVVEDVKDGE EEDDIDDDED DNVDGAGQNE SSKQSRSEKK SRKAMLKLGM KPVTDVSRVT IKRSKNVLFV
101: ISKPDVFKSP NSETYVIFCE AKIDDMSSQL QAQAAQRFKM PDVASMIPTL MPLKQSLLHK RRKMMMMLMR LVLKLRTLIL
101: ISKPDVFKSP NSETYVIFCE AKIDDMSSQL QAQAAQRFKM PDVASMIPTL MPLKQSLLHK RRKMMMMLMR LVLKLRTLIL
001: MPGPVIEEVN EEALMDAIKE QMKLQKENDV VVEDVKDGDE DDDDVDDDDD EIADGAGENE ASKQSRSEKK SRKAMLKLGM KPVTDVSRVT IKRSKNVLFV
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNT DGSEAATVAQ EEEDDEDVDE TGVEAKDIDL VMTQAGVSRP KAVKALKESN
201: GDIVSAIMEL TT
101: ISKPDVFKSP NSETYVIFGE AKIDDMSSQL QAQAAQRFKM PDVASMIPNT DGSEAATVAQ EEEDDEDVDE TGVEAKDIDL VMTQAGVSRP KAVKALKESN
201: GDIVSAIMEL TT
Arabidopsis Description
Putative alpha NAC [Source:UniProtKB/TrEMBL;Acc:Q0WWN5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.