Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 53.54 | 88.32 |
| Zm00001d048479_P002 | Maize | plastid | 79.65 | 78.95 |
| TraesCS4B01G347400.1 | Wheat | nucleus | 73.01 | 75.0 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 73.45 | 74.77 |
| Os03t0121700-01 | Rice | plasma membrane | 73.01 | 74.66 |
| TraesCS5A01G516100.1 | Wheat | nucleus | 73.01 | 74.32 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 64.6 | 69.52 |
| Solyc03g080160.2.1 | Tomato | nucleus | 61.95 | 68.63 |
| CDY31855 | Canola | cytosol | 41.15 | 67.88 |
| GSMUA_Achr1P06350_001 | Banana | cytosol | 61.06 | 64.49 |
| PGSC0003DMT400001566 | Potato | cytosol | 57.96 | 64.22 |
| KRH64284 | Soybean | endoplasmic reticulum | 61.5 | 63.76 |
| KRH53644 | Soybean | endoplasmic reticulum | 62.39 | 63.23 |
| KRH64285 | Soybean | endoplasmic reticulum | 61.5 | 62.33 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 56.64 | 61.24 |
| EES15306 | Sorghum | nucleus | 55.31 | 60.39 |
| KRH53645 | Soybean | endoplasmic reticulum | 59.73 | 60.0 |
| Bra000711.1-P | Field mustard | cytosol, nucleus, plastid | 54.87 | 59.62 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 54.87 | 59.62 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 53.54 | 59.31 |
| CDX86860 | Canola | cytosol | 55.31 | 58.96 |
| Bra037920.1-P | Field mustard | cytosol | 55.31 | 58.96 |
| EER94856 | Sorghum | nucleus | 53.54 | 58.45 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 53.1 | 58.25 |
| Bra012259.1-P | Field mustard | cytosol | 49.12 | 57.81 |
| GSMUA_Achr5P20310_001 | Banana | mitochondrion | 45.13 | 51.52 |
| AT3G49470.2 | Thale cress | cytosol | 52.65 | 51.29 |
| CDX99543 | Canola | nucleus | 38.94 | 48.89 |
| Os07t0407300-00 | Rice | cytosol, nucleus, plastid | 23.89 | 44.26 |
| CDY54248 | Canola | cytosol | 42.48 | 43.24 |
| Os01t0698900-00 | Rice | plasma membrane | 58.85 | 34.82 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EntrezGene:8085725 | UniProt:C5X0W9 | EnsemblPlants:EER95617 |
| ProteinID:EER95617 | ProteinID:EER95617.1 | InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005854 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom |
| PFAM:PF01849 | PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 | SMART:SM01407 |
| EnsemblPlantsGene:SORBI_3001G527900 | UniParc:UPI0001A83242 | RefSeq:XP_002468619.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:-:79191060..79192098
Molecular Weight (calculated)
24235.1 Da
IEP (calculated)
4.020
GRAVY (calculated)
-0.547
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSEQAPAAE VVEGSEAPAP VVESEEAVPK AEEQQKEDEA PVVVEDVKEG EVDEDDDDDD DDDEADEGEL GAGATEGAKQ SRSEKKSRKA MMKLGMKPVT
101: GVTRITIKRA KNILFVVSKP DVFKSPTSET YVIFGEAKIE DLSSQLQAQA AQQFRMQDLS KVMAKQDAAA AAAAPADEEE EVDEDGIEPR DIDLVMTQAS
201: VTRAKAVKAL KAHDGDIVSA IMELTA
101: GVTRITIKRA KNILFVVSKP DVFKSPTSET YVIFGEAKIE DLSSQLQAQA AQQFRMQDLS KVMAKQDAAA AAAAPADEEE EVDEDGIEPR DIDLVMTQAS
201: VTRAKAVKAL KAHDGDIVSA IMELTA
001: MSPPPAVVTE SADGQPEQPP VTAIAEELEK KLQTDEPIVE DVKDDEDDDD DDEEEEDDDA QGVSGSSKQS RSEKKSRKAM LKLGMKPVTG VSRVTIKRTK
101: NVLFFISKPD VFKSPHSETY VIFGEAKIED LSSQLQTQAA QQFRMPEIGA TSQRAEASTA TVEAQVEEDE EEIDETGVEA RDIDLVMTQA GVSRSKAVKA
201: LKSHDGDIVS AIMELTT
101: NVLFFISKPD VFKSPHSETY VIFGEAKIED LSSQLQTQAA QQFRMPEIGA TSQRAEASTA TVEAQVEEDE EEIDETGVEA RDIDLVMTQA GVSRSKAVKA
201: LKSHDGDIVS AIMELTT
Arabidopsis Description
NACA2Nascent polypeptide-associated complex subunit alpha-like protein 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.