Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15306 | Sorghum | nucleus | 93.72 | 93.72 |
| Zm00001d047477_P001 | Maize | plastid | 91.79 | 93.6 |
| Zm00001d029173_P004 | Maize | nucleus | 92.27 | 92.27 |
| TraesCS4A01G138000.1 | Wheat | plastid, unclear | 81.16 | 80.77 |
| TraesCS4D01G164400.1 | Wheat | nucleus | 80.68 | 80.68 |
| TraesCS4B01G154200.1 | Wheat | nucleus | 80.19 | 80.58 |
| GSMUA_Achr10P... | Banana | nucleus | 75.85 | 78.5 |
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 73.91 | 76.5 |
| Solyc10g081030.1.1 | Tomato | nucleus | 73.43 | 76.38 |
| VIT_13s0067g00710.t01 | Wine grape | nucleus | 73.91 | 75.74 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 72.95 | 74.75 |
| PGSC0003DMT400018552 | Potato | nucleus | 71.5 | 74.75 |
| Solyc10g078150.1.1 | Tomato | nucleus | 71.01 | 74.24 |
| KRH66666 | Soybean | endoplasmic reticulum | 71.01 | 74.24 |
| KRG95031 | Soybean | endoplasmic reticulum | 71.5 | 73.27 |
| KRG95032 | Soybean | nucleus | 71.5 | 72.2 |
| AT5G13850.1 | Thale cress | cytosol | 71.01 | 72.06 |
| KRH66664 | Soybean | endoplasmic reticulum | 70.05 | 71.43 |
| CDY00769 | Canola | cytosol | 69.08 | 71.14 |
| CDX73823 | Canola | cytosol | 69.08 | 71.14 |
| AT3G12390.1 | Thale cress | cytosol | 69.57 | 70.94 |
| CDY50549 | Canola | nucleus | 68.6 | 70.3 |
| CDY71160 | Canola | nucleus | 67.63 | 69.31 |
| Bra034757.1-P | Field mustard | cytosol | 68.12 | 69.12 |
| CDY08433 | Canola | plasma membrane | 68.12 | 69.12 |
| CDY42148 | Canola | nucleus | 67.63 | 68.97 |
| Bra001450.1-P | Field mustard | cytosol | 62.8 | 68.78 |
| PGSC0003DMT400072220 | Potato | cytosol, endoplasmic reticulum, nucleus | 66.18 | 68.5 |
| Bra038716.1-P | Field mustard | cytosol | 43.48 | 67.67 |
| CDX69622 | Canola | cytosol | 66.67 | 66.99 |
| CDY09831 | Canola | nucleus | 65.7 | 66.02 |
| Bra008797.1-P | Field mustard | cytosol | 66.18 | 65.87 |
| GSMUA_Achr5P17540_001 | Banana | endoplasmic reticulum, extracellular, golgi | 68.6 | 59.41 |
| EER95617 | Sorghum | cytosol | 58.45 | 53.54 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EntrezGene:8082651 | UniProt:C5WZS8 | ncoils:Coil |
| EnsemblPlants:EER94856 | ProteinID:EER94856 | ProteinID:EER94856.1 | InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf |
| InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 | PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF8 |
| SMART:SM01407 | EnsemblPlantsGene:SORBI_3001G371400 | unigene:Sbi.18525 | UniParc:UPI0001A8344B | RefSeq:XP_002467858.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:65965816..65967892
Molecular Weight (calculated)
22743.0 Da
IEP (calculated)
3.999
GRAVY (calculated)
-0.863
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAQTAEELA TQIEQQKLEE QKTEAEEVVV EDEEDDDEDD DDDDKDDDEL DGQEEDASGK SKQSRSEKKS RKAMLKLGMK SITGVSRVTV KKSKNILFVI
101: SKPDVFKSPN SDTYVIFGEA KIEDLSSQLQ SQAAEQFKAP DLSQMISSPE TSGPGQEDNE EEVDETGVEA KDIELVMTQA TVSRSKAVKA LKASNGDIVT
201: AIMDLTN
101: SKPDVFKSPN SDTYVIFGEA KIEDLSSQLQ SQAAEQFKAP DLSQMISSPE TSGPGQEDNE EEVDETGVEA KDIELVMTQA TVSRSKAVKA LKASNGDIVT
201: AIMDLTN
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.