Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G154200.1 | Wheat | nucleus | 90.82 | 91.26 |
| TraesCS4A01G138000.1 | Wheat | plastid, unclear | 87.44 | 87.02 |
| EES15306 | Sorghum | nucleus | 80.68 | 80.68 |
| EER94856 | Sorghum | nucleus | 80.68 | 80.68 |
| Zm00001d047477_P001 | Maize | plastid | 78.74 | 80.3 |
| Zm00001d029173_P004 | Maize | nucleus | 77.78 | 77.78 |
| Zm00001d049830_P002 | Maize | extracellular | 75.85 | 75.48 |
| GSMUA_Achr10P... | Banana | nucleus | 72.46 | 75.0 |
| Solyc10g081030.1.1 | Tomato | nucleus | 71.5 | 74.37 |
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 71.5 | 74.0 |
| KRG95031 | Soybean | endoplasmic reticulum | 71.98 | 73.76 |
| VIT_13s0067g00710.t01 | Wine grape | nucleus | 71.98 | 73.76 |
| Solyc10g078150.1.1 | Tomato | nucleus | 70.53 | 73.74 |
| PGSC0003DMT400018552 | Potato | nucleus | 70.53 | 73.74 |
| AT3G12390.1 | Thale cress | cytosol | 71.5 | 72.91 |
| TraesCS1D01G236500.1 | Wheat | cytosol | 71.98 | 72.68 |
| KRH66666 | Soybean | endoplasmic reticulum | 69.08 | 72.22 |
| CDY50549 | Canola | nucleus | 69.08 | 70.79 |
| KRG95032 | Soybean | nucleus | 70.05 | 70.73 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 68.6 | 70.3 |
| KRH66664 | Soybean | endoplasmic reticulum | 68.6 | 69.95 |
| CDY71160 | Canola | nucleus | 68.12 | 69.8 |
| CDY00769 | Canola | cytosol | 67.63 | 69.65 |
| CDX73823 | Canola | cytosol | 67.63 | 69.65 |
| AT5G13850.1 | Thale cress | cytosol | 68.12 | 69.12 |
| Bra001450.1-P | Field mustard | cytosol | 62.32 | 68.25 |
| PGSC0003DMT400072220 | Potato | cytosol, endoplasmic reticulum, nucleus | 65.7 | 68.0 |
| Bra038716.1-P | Field mustard | cytosol | 43.48 | 67.67 |
| CDY08433 | Canola | plasma membrane | 66.18 | 67.16 |
| Bra034757.1-P | Field mustard | cytosol | 66.18 | 67.16 |
| CDY09831 | Canola | nucleus | 66.18 | 66.5 |
| CDY42148 | Canola | nucleus | 65.22 | 66.5 |
| CDX69622 | Canola | cytosol | 64.25 | 64.56 |
| Bra008797.1-P | Field mustard | cytosol | 64.25 | 63.94 |
| TraesCS3D01G470600.2 | Wheat | cytosol | 57.0 | 61.46 |
| GSMUA_Achr5P17540_001 | Banana | endoplasmic reticulum, extracellular, golgi | 68.6 | 59.41 |
| TraesCS3D01G470500.1 | Wheat | cytosol, nucleus, plastid | 53.14 | 58.51 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 58.45 | 54.5 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | ncoils:Coil | InterPro:EGD2/NACA | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | InterPro:IPR002715 | InterPro:IPR038187 |
| InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 | PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 |
| PANTHER:PTHR21713:SF8 | SMART:SM01407 | EnsemblPlantsGene:TraesCS4D01G164400 | EnsemblPlants:TraesCS4D01G164400.1 | TIGR:cd14358 | SEG:seg |
Description
No Description!
Coordinates
chr4D:+:264485962..264489497
Molecular Weight (calculated)
22547.8 Da
IEP (calculated)
4.022
GRAVY (calculated)
-0.757
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAQTAEELA AQIEQEQVEA KKTEAEEVVV EDDDDDDDDD NDEDDDDNDD LDGQEGDASG KSKQSRSEKK SRKAMLKLGM KSITGVSRVT VKKSKNILFV
101: ISKPDVFKSP NSETYVIFGE AKIEDLSSQL QSQAAEQFKA PDLSQMISSP EASGMEHDDN EVVNDEGVEP KDIELVMTQA GVSRAKAVRA LKSANGDIVT
201: AIMEVTT
101: ISKPDVFKSP NSETYVIFGE AKIEDLSSQL QSQAAEQFKA PDLSQMISSP EASGMEHDDN EVVNDEGVEP KDIELVMTQA GVSRAKAVRA LKSANGDIVT
201: AIMEVTT
001: MTAEQKVELA AKLEEQKIDL DKPEVEDDDD NDEDDSEDDD EAEGHDGEAG GRSKQSRSEK KSRKAMLKLG MKPITGVSRV TVKKSKNILF VISKPDVFKS
101: PASDTYVIFG EAKIEDLSSQ LQSQAAEQFK APNLSNVISQ GETSSAATAA AVQDDDDEEV DEEGVEPKDI ELVMTQAGVS KPRAVKALKL ANGDIVSAIM
201: ELTT
101: PASDTYVIFG EAKIEDLSSQ LQSQAAEQFK APNLSNVISQ GETSSAATAA AVQDDDDEEV DEEGVEPKDI ELVMTQAGVS KPRAVKALKL ANGDIVSAIM
201: ELTT
Arabidopsis Description
NACA3Nascent polypeptide-associated complex subunit alpha-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6ICZ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.