Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018552 | Potato | nucleus | 96.97 | 96.97 |
| Solyc10g081030.1.1 | Tomato | nucleus | 89.9 | 89.45 |
| KRH66666 | Soybean | endoplasmic reticulum | 80.81 | 80.81 |
| GSMUA_Achr10P... | Banana | nucleus | 80.81 | 80.0 |
| KRG95031 | Soybean | endoplasmic reticulum | 80.81 | 79.21 |
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 79.29 | 78.5 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 79.8 | 78.22 |
| AT3G12390.1 | Thale cress | cytosol | 79.29 | 77.34 |
| Os01t0938900-02 | Rice | nucleus | 78.79 | 77.23 |
| KRH66664 | Soybean | endoplasmic reticulum | 78.79 | 76.85 |
| Os05t0373700-01 | Rice | extracellular, golgi, plasma membrane, plastid | 79.29 | 76.59 |
| TraesCS1D01G236500.1 | Wheat | cytosol | 79.29 | 76.59 |
| Bra038716.1-P | Field mustard | cytosol | 51.01 | 75.94 |
| KRG95032 | Soybean | nucleus | 77.78 | 75.12 |
| TraesCS1B01G248000.1 | Wheat | golgi, plastid, unclear | 77.78 | 75.12 |
| HORVU1Hr1G057970.2 | Barley | nucleus | 79.29 | 75.12 |
| CDY50549 | Canola | nucleus | 76.26 | 74.75 |
| AT5G13850.1 | Thale cress | cytosol | 76.77 | 74.51 |
| CDY71160 | Canola | nucleus | 75.76 | 74.26 |
| CDY00769 | Canola | cytosol | 74.75 | 73.63 |
| CDX73823 | Canola | cytosol | 74.75 | 73.63 |
| CDY08433 | Canola | plasma membrane | 75.25 | 73.04 |
| Bra034757.1-P | Field mustard | cytosol | 75.25 | 73.04 |
| EES15306 | Sorghum | nucleus | 76.26 | 72.95 |
| CDY42148 | Canola | nucleus | 73.74 | 71.92 |
| Bra001450.1-P | Field mustard | cytosol | 68.18 | 71.43 |
| EER94856 | Sorghum | nucleus | 74.24 | 71.01 |
| TraesCS4D01G164400.1 | Wheat | nucleus | 73.74 | 70.53 |
| CDY09831 | Canola | nucleus | 73.23 | 70.39 |
| TraesCS3A01G474500.1 | Wheat | nucleus | 67.17 | 70.0 |
| TraesCS4A01G138000.1 | Wheat | plastid, unclear | 73.23 | 69.71 |
| Zm00001d029173_P004 | Maize | nucleus | 72.73 | 69.57 |
| Zm00001d047477_P001 | Maize | plastid | 71.21 | 69.46 |
| CDX69622 | Canola | cytosol | 71.72 | 68.93 |
| Bra008797.1-P | Field mustard | cytosol | 72.22 | 68.75 |
| Zm00001d049830_P002 | Maize | extracellular | 72.22 | 68.75 |
| TraesCS4B01G154200.1 | Wheat | nucleus | 71.21 | 68.45 |
| TraesCS3A01G474200.1 | Wheat | nucleus | 68.18 | 68.18 |
| TraesCS3B01G518200.1 | Wheat | cytosol | 44.44 | 66.67 |
| TraesCS3B01G518000.1 | Wheat | cytosol, nucleus, plastid | 68.18 | 66.5 |
| TraesCS3B01G518300.1 | Wheat | cytosol, nucleus, plastid | 66.67 | 66.33 |
| HORVU3Hr1G102520.6 | Barley | cytosol, nucleus | 68.18 | 65.22 |
| TraesCS3D01G470600.2 | Wheat | cytosol | 63.13 | 65.1 |
| TraesCS3D01G470500.1 | Wheat | cytosol, nucleus, plastid | 60.61 | 63.83 |
| TraesCS3A01G474600.1 | Wheat | cytosol | 63.64 | 63.32 |
| TraesCS3B01G517400.1 | Wheat | cytosol | 63.13 | 62.81 |
| TraesCSU01G140100.1 | Wheat | nucleus | 62.63 | 62.31 |
| Solyc03g080160.2.1 | Tomato | nucleus | 63.64 | 61.76 |
| HORVU2Hr1G015260.1 | Barley | cytosol, nucleus, plastid | 62.63 | 61.39 |
| TraesCS3B01G518400.1 | Wheat | cytosol | 60.1 | 60.71 |
| TraesCS3A01G474800.1 | Wheat | cytosol, nucleus, plastid | 59.09 | 57.92 |
| TraesCSU01G140000.1 | Wheat | nucleus | 56.57 | 55.17 |
| TraesCS3B01G517500.1 | Wheat | cytosol, golgi, nucleus | 54.55 | 48.0 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | InterPro:IPR002715 | InterPro:IPR038187 | UniProt:K4D258 |
| InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 | PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 |
| PANTHER:PTHR21713:SF16 | SMART:SM01407 | EnsemblPlantsGene:Solyc10g078150.1 | EnsemblPlants:Solyc10g078150.1.1 | UniParc:UPI000276A0AC | SEG:seg |
Description
No Description!
Coordinates
chr10:+:60022804..60025689
Molecular Weight (calculated)
21699.1 Da
IEP (calculated)
4.125
GRAVY (calculated)
-0.717
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAQSQEEIL AAHLEQQQIE SEEPIIEDED DNDEDDDDED DKDDDDVEGG SGRSKQSRSE KKSRKAMIKL GMKPIPMVSR VTVKKSKNIL FVISKPDVFK
101: SPASDTYVIF GEAKIEDLSS QLQSQAAEQF KAPNLSNVIS KPEPSTVAQD DEDVDETGVE PKDIELVMTQ AGVSRAKSVK ALKAANGDIV SAIMELTN
101: SPASDTYVIF GEAKIEDLSS QLQSQAAEQF KAPNLSNVIS KPEPSTVAQD DEDVDETGVE PKDIELVMTQ AGVSRAKSVK ALKAANGDIV SAIMELTN
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.