Factsheet for TraesCSU01G140000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G140100.1	Wheat	nucleus	69.95	71.36
Os01t0938900-02	Rice	nucleus	61.08	61.39
Bra001450.1-P	Field mustard	cytosol	56.16	60.32
GSMUA_Achr10P...	Banana	nucleus	59.11	60.0
VIT_13s0067g00710.t01	Wine grape	nucleus	58.62	58.91
CDX69622	Canola	cytosol	59.61	58.74
Bra038716.1-P	Field mustard	cytosol	38.42	58.65
KRH66666	Soybean	endoplasmic reticulum	57.14	58.59
Bra008797.1-P	Field mustard	cytosol	59.61	58.17
GSMUA_Achr1P11330_001	Banana	plasma membrane	57.14	58.0
KRH66664	Soybean	endoplasmic reticulum	57.64	57.64
Solyc10g081030.1.1	Tomato	nucleus	56.16	57.29
CDX73823	Canola	cytosol	56.65	57.21
CDY00769	Canola	cytosol	56.65	57.21
AT3G12390.1	Thale cress	cytosol	56.65	56.65
Solyc10g078150.1.1	Tomato	nucleus	55.17	56.57
CDY42148	Canola	nucleus	56.16	56.16
PGSC0003DMT400018552	Potato	nucleus	54.68	56.06
PGSC0003DMT400072220	Potato	cytosol, endoplasmic reticulum, nucleus	55.17	56.0
KRG95031	Soybean	endoplasmic reticulum	55.66	55.94
CDY09831	Canola	nucleus	56.65	55.83
VIT_08s0040g00600.t01	Wine grape	cytosol	55.17	55.45
CDY08433	Canola	plasma membrane	55.17	54.9
Bra034757.1-P	Field mustard	cytosol	55.17	54.9
AT5G13850.1	Thale cress	cytosol	55.17	54.9
KRG95032	Soybean	nucleus	55.17	54.63
TraesCS3B01G517500.1	Wheat	cytosol, golgi, nucleus	58.62	52.89
CDY71160	Canola	nucleus	51.23	51.49
CDY50549	Canola	nucleus	51.23	51.49
GSMUA_Achr5P17540_001	Banana	endoplasmic reticulum, extracellular, golgi	54.68	46.44

Protein Annotations

EnsemblPlants:TraesCSU01G140000.1	EnsemblPlantsGene:TraesCSU01G140000	Gene3D:1.10.8.10	Gene3D:2.20.70.30	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005854	InterPro:EGD2/NACA	InterPro:IPR002715	InterPro:IPR038187
InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	PANTHER:PTHR21713	PANTHER:PTHR21713:SF16	PFAM:PF01849	PFscan:PS51151
PIRSF:PIRSF015901	SEG:seg	SMART:SM01407	TIGR:cd14358	MapMan:19.1.2.1.1	:

Description

No Description!

Coordinates

chrUn:+:131948947..131952153

Molecular Weight (calculated)

21922.8 Da

IEP (calculated)

5.002

GRAVY (calculated)

-0.533

Length

203 amino acids

Sequence
(BLAST)

001: MTVAELLRAQ LEEQNIEVIL HSDPSRLSDL NSVSSGSGLA ERRGSEQALS LIGANPEWGD AGGRSRQSRS EKKSRKAMEK LGMKAITGVT RVTIKKSKTP
101: DVFKSSQSDT YIMFGEVKLE DPSTQLQTQA AEQFKVPGPS SVISRGEPSV AAAQDDEEVD DTDVDKKDVE LVMRQASVSR SRAVKALKAA DGDIVSAIME
201: LTN

Best Arabidopsis Sequence Match ( AT3G12390.1 )
(BLAST)

001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT

Arabidopsis Description

Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.