Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 88.0 | 88.0 |
| VIT_13s0067g00710.t01 | Wine grape | nucleus | 88.5 | 87.62 |
| KRH66666 | Soybean | endoplasmic reticulum | 83.5 | 84.34 |
| Solyc10g081030.1.1 | Tomato | nucleus | 83.0 | 83.42 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 84.0 | 83.17 |
| KRG95031 | Soybean | endoplasmic reticulum | 82.0 | 81.19 |
| KRG95032 | Soybean | nucleus | 83.0 | 80.98 |
| Solyc10g078150.1.1 | Tomato | nucleus | 80.0 | 80.81 |
| PGSC0003DMT400018552 | Potato | nucleus | 80.0 | 80.81 |
| Os01t0938900-02 | Rice | nucleus | 80.5 | 79.7 |
| KRH66664 | Soybean | endoplasmic reticulum | 80.5 | 79.31 |
| TraesCS1D01G236500.1 | Wheat | cytosol | 80.5 | 78.54 |
| HORVU1Hr1G057970.2 | Barley | nucleus | 82.0 | 78.47 |
| TraesCS1B01G248000.1 | Wheat | golgi, plastid, unclear | 79.5 | 77.56 |
| Os05t0373700-01 | Rice | extracellular, golgi, plasma membrane, plastid | 79.5 | 77.56 |
| AT3G12390.1 | Thale cress | cytosol | 78.5 | 77.34 |
| Zm00001d047477_P001 | Maize | plastid | 78.5 | 77.34 |
| PGSC0003DMT400072220 | Potato | cytosol, endoplasmic reticulum, nucleus | 77.0 | 77.0 |
| AT5G13850.1 | Thale cress | cytosol | 78.5 | 76.96 |
| Zm00001d029173_P004 | Maize | nucleus | 79.0 | 76.33 |
| EES15306 | Sorghum | nucleus | 79.0 | 76.33 |
| EER94856 | Sorghum | nucleus | 78.5 | 75.85 |
| Bra038716.1-P | Field mustard | cytosol | 50.0 | 75.19 |
| TraesCS4B01G154200.1 | Wheat | nucleus | 77.0 | 74.76 |
| CDX73823 | Canola | cytosol | 75.0 | 74.63 |
| CDY00769 | Canola | cytosol | 75.0 | 74.63 |
| CDY50549 | Canola | nucleus | 74.5 | 73.76 |
| Zm00001d049830_P002 | Maize | extracellular | 76.5 | 73.56 |
| CDY42148 | Canola | nucleus | 74.5 | 73.4 |
| CDY09831 | Canola | nucleus | 75.5 | 73.3 |
| CDY71160 | Canola | nucleus | 74.0 | 73.27 |
| TraesCS3A01G474500.1 | Wheat | nucleus | 69.5 | 73.16 |
| CDX69622 | Canola | cytosol | 75.0 | 72.82 |
| CDY08433 | Canola | plasma membrane | 74.0 | 72.55 |
| Bra034757.1-P | Field mustard | cytosol | 74.0 | 72.55 |
| TraesCS4D01G164400.1 | Wheat | nucleus | 75.0 | 72.46 |
| Bra008797.1-P | Field mustard | cytosol | 75.0 | 72.12 |
| Bra001450.1-P | Field mustard | cytosol | 68.0 | 71.96 |
| TraesCS4A01G138000.1 | Wheat | plastid, unclear | 74.5 | 71.63 |
| TraesCS3B01G518000.1 | Wheat | cytosol, nucleus, plastid | 72.0 | 70.94 |
| TraesCS3B01G518200.1 | Wheat | cytosol | 46.0 | 69.7 |
| TraesCS3B01G518300.1 | Wheat | cytosol, nucleus, plastid | 69.0 | 69.35 |
| TraesCS3D01G470600.2 | Wheat | cytosol | 66.5 | 69.27 |
| TraesCS3D01G470500.1 | Wheat | cytosol, nucleus, plastid | 64.5 | 68.62 |
| TraesCS3A01G474200.1 | Wheat | nucleus | 67.5 | 68.18 |
| HORVU3Hr1G102520.6 | Barley | cytosol, nucleus | 70.0 | 67.63 |
| GSMUA_Achr5P17540_001 | Banana | endoplasmic reticulum, extracellular, golgi | 80.5 | 67.36 |
| TraesCS3A01G474600.1 | Wheat | cytosol | 67.0 | 67.34 |
| TraesCS3B01G517400.1 | Wheat | cytosol | 67.0 | 67.34 |
| TraesCSU01G140100.1 | Wheat | nucleus | 66.0 | 66.33 |
| TraesCS3B01G518400.1 | Wheat | cytosol | 64.0 | 65.31 |
| HORVU2Hr1G015260.1 | Barley | cytosol, nucleus, plastid | 65.0 | 64.36 |
| TraesCS3A01G474800.1 | Wheat | cytosol, nucleus, plastid | 61.0 | 60.4 |
| GSMUA_Achr1P06350_001 | Banana | cytosol | 64.5 | 60.28 |
| TraesCSU01G140000.1 | Wheat | nucleus | 60.0 | 59.11 |
| TraesCS3B01G517500.1 | Wheat | cytosol, golgi, nucleus | 56.0 | 49.78 |
| GSMUA_Achr5P20310_001 | Banana | mitochondrion | 46.5 | 46.97 |
| GSMUA_Achr11P... | Banana | cytosol | 34.0 | 41.21 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | EnsemblPlantsGene:GSMUA_Achr10G01260_001 | EnsemblPlants:GSMUA_Achr10P01260_001 | EnsemblPlants:GSMUA_Achr10T01260_001 |
| InterPro:IPR002715 | InterPro:IPR038187 | UniProt:M0REF3 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 |
| PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF16 | SMART:SM01407 | UniParc:UPI0002957379 |
| SEG:seg | : | : | : | : | : |
Description
Nascent polypeptide-associated complex subunit alpha-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G01260_001]
Coordinates
chr10:-:2525209..2534288
Molecular Weight (calculated)
21799.2 Da
IEP (calculated)
4.193
GRAVY (calculated)
-0.712
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAQTQEELL AAHLEQQKID PDEPVVEDDE EEDDDDDEDD DKDDAEGQAG DASGRSKQSR SEKKSRKAML KLGMKPIPGV SRVTVKKSKN ILFVISKPDV
101: FKSPTSDTYV IFGEAKIEDL SSQLQTQAAE QFKAPDLSHV ISKPEPSAAA HDDEEVDETG VELKDIELVM TQAGVSRSKA VKALKAADGD IVTAIMELTN
101: FKSPTSDTYV IFGEAKIEDL SSQLQTQAAE QFKAPDLSHV ISKPEPSAAA HDDEEVDETG VELKDIELVM TQAGVSRSKA VKALKAADGD IVTAIMELTN
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.