CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95031	Soybean	endoplasmic reticulum	90.24	91.58
KRH66664	Soybean	endoplasmic reticulum	87.32	88.18
KRH66666	Soybean	endoplasmic reticulum	83.9	86.87
GSMUA_Achr10P...	Banana	nucleus	80.98	83.0
GSMUA_Achr1P11330_001	Banana	plasma membrane	78.05	80.0
VIT_08s0040g00600.t01	Wine grape	cytosol	78.05	79.21
Solyc10g081030.1.1	Tomato	nucleus	76.59	78.89
Solyc10g078150.1.1	Tomato	nucleus	75.12	77.78
Os01t0938900-02	Rice	nucleus	76.59	77.72
PGSC0003DMT400018552	Potato	nucleus	74.15	76.77
AT3G12390.1	Thale cress	cytosol	75.61	76.35
TraesCS1D01G236500.1	Wheat	cytosol	75.12	75.12
HORVU1Hr1G057970.2	Barley	nucleus	76.59	75.12
EES15306	Sorghum	nucleus	74.63	73.91
Os05t0373700-01	Rice	extracellular, golgi, plasma membrane, plastid	73.66	73.66
TraesCS1B01G248000.1	Wheat	golgi, plastid, unclear	73.66	73.66
AT5G13850.1	Thale cress	cytosol	73.17	73.53
PGSC0003DMT400072220	Potato	cytosol, endoplasmic reticulum, nucleus	71.71	73.5
Zm00001d029173_P004	Maize	nucleus	73.66	72.95
Zm00001d047477_P001	Maize	plastid	71.71	72.41
CDY50549	Canola	nucleus	71.22	72.28
CDX73823	Canola	cytosol	70.73	72.14
CDY00769	Canola	cytosol	70.73	72.14
EER94856	Sorghum	nucleus	72.2	71.5
CDY71160	Canola	nucleus	70.24	71.29
CDX69622	Canola	cytosol	71.22	70.87
CDY09831	Canola	nucleus	71.22	70.87
Bra038716.1-P	Field mustard	cytosol	45.85	70.68
Zm00001d049830_P002	Maize	extracellular	71.71	70.67
Bra034757.1-P	Field mustard	cytosol	70.24	70.59
CDY08433	Canola	plasma membrane	70.24	70.59
CDY42148	Canola	nucleus	69.76	70.44
Bra008797.1-P	Field mustard	cytosol	71.22	70.19
TraesCS4D01G164400.1	Wheat	nucleus	70.73	70.05
TraesCS4B01G154200.1	Wheat	nucleus	70.24	69.9
Bra001450.1-P	Field mustard	cytosol	64.39	69.84
TraesCS4A01G138000.1	Wheat	plastid, unclear	70.73	69.71
TraesCS3A01G474500.1	Wheat	nucleus	63.41	68.42
TraesCS3B01G518000.1	Wheat	cytosol, nucleus, plastid	65.85	66.5
TraesCS3B01G518300.1	Wheat	cytosol, nucleus, plastid	64.39	66.33
TraesCS3A01G474200.1	Wheat	nucleus	63.9	66.16
TraesCS3B01G518200.1	Wheat	cytosol	41.95	65.15
TraesCS3D01G470600.2	Wheat	cytosol	60.98	65.1
TraesCS3D01G470500.1	Wheat	cytosol, nucleus, plastid	58.05	63.3
TraesCS3A01G474600.1	Wheat	cytosol	60.98	62.81
HORVU3Hr1G102520.6	Barley	cytosol, nucleus	63.41	62.8
TraesCS3B01G517400.1	Wheat	cytosol	60.49	62.31
TraesCSU01G140100.1	Wheat	nucleus	60.49	62.31
HORVU2Hr1G015260.1	Barley	cytosol, nucleus, plastid	60.0	60.89
TraesCS3B01G518400.1	Wheat	cytosol	58.05	60.71
KRH53644	Soybean	endoplasmic reticulum	63.41	58.3
KRH64285	Soybean	endoplasmic reticulum	60.98	56.05
TraesCS3A01G474800.1	Wheat	cytosol, nucleus, plastid	54.63	55.45
TraesCSU01G140000.1	Wheat	nucleus	54.63	55.17
KRH64284	Soybean	endoplasmic reticulum	58.54	55.05
KRH53645	Soybean	endoplasmic reticulum	59.51	54.22
TraesCS3B01G517500.1	Wheat	cytosol, golgi, nucleus	50.24	45.78

Protein Annotations

Gene3D:1.10.8.10	EntrezGene:100791967	MapMan:19.1.2.1.1	Gene3D:2.20.70.30	UniProt:A0A0R0EWX9	EMBL:ACUP02012071
InterPro:EGD2/NACA	EnsemblPlantsGene:GLYMA_19G125500	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005854	InterPro:IPR002715	InterPro:IPR038187	EnsemblPlants:KRG95032	ProteinID:KRG95032	ProteinID:KRG95032.1
InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	PFAM:PF01849	PIRSF:PIRSF015901	PFscan:PS51151	PANTHER:PTHR21713
PANTHER:PTHR21713:SF16	SMART:SM01407	UniParc:UPI000233E5DB	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr19:-:38377662..38380547

Molecular Weight (calculated)

22454.0 Da

IEP (calculated)

4.219

GRAVY (calculated)

-0.823

Length

205 amino acids

Sequence
(BLAST)

001: MKNPKKTETQ EELLAQHLEQ QKIHDDEPVV EDDDDEEVDD DDDDEDDDHD EGLEGDASGR SKQTRSEKKS RKAMLKLGMK PVTGVSRVTV KKSKNILFVI
101: SKPDVFKSPT SDTYIIFGEA KIEDLSSQLQ TQAAEQFKAP NLSNDGLKPE SSAVAQDDEE VDEAGVDPKD IELVMTQAGV SRPKAVKALK AAGGDIVAAI
201: MELTN

Best Arabidopsis Sequence Match ( AT3G12390.1 )
(BLAST)

001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT

Arabidopsis Description

Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.