Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73823 | Canola | cytosol | 100.0 | 100.0 |
| CDY42148 | Canola | nucleus | 93.03 | 92.12 |
| CDY08433 | Canola | plasma membrane | 93.03 | 91.67 |
| Bra001450.1-P | Field mustard | cytosol | 86.07 | 91.53 |
| CDY50549 | Canola | nucleus | 87.06 | 86.63 |
| AT3G12390.1 | Thale cress | cytosol | 86.57 | 85.71 |
| CDY71160 | Canola | nucleus | 86.07 | 85.64 |
| CDX69622 | Canola | cytosol | 77.11 | 75.24 |
| GSMUA_Achr10P... | Banana | nucleus | 74.63 | 75.0 |
| VIT_13s0067g00710.t01 | Wine grape | nucleus | 75.12 | 74.75 |
| Solyc10g078150.1.1 | Tomato | nucleus | 73.63 | 74.75 |
| CDY09831 | Canola | nucleus | 76.12 | 74.27 |
| TraesCS1D01G236500.1 | Wheat | cytosol | 75.62 | 74.15 |
| Solyc10g081030.1.1 | Tomato | nucleus | 72.64 | 73.37 |
| TraesCS1B01G248000.1 | Wheat | golgi, plastid, unclear | 74.63 | 73.17 |
| CDY31855 | Canola | cytosol | 49.75 | 72.99 |
| KRH66664 | Soybean | endoplasmic reticulum | 73.63 | 72.91 |
| Os05t0373700-01 | Rice | extracellular, golgi, plasma membrane, plastid | 73.63 | 72.2 |
| Os01t0938900-02 | Rice | nucleus | 72.14 | 71.78 |
| PGSC0003DMT400018552 | Potato | nucleus | 70.65 | 71.72 |
| Zm00001d049830_P002 | Maize | extracellular | 74.13 | 71.63 |
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 71.14 | 71.5 |
| Zm00001d029173_P004 | Maize | nucleus | 73.63 | 71.5 |
| HORVU1Hr1G057970.2 | Barley | nucleus | 74.13 | 71.29 |
| KRG95031 | Soybean | endoplasmic reticulum | 71.64 | 71.29 |
| KRH66666 | Soybean | endoplasmic reticulum | 70.15 | 71.21 |
| EES15306 | Sorghum | nucleus | 73.13 | 71.01 |
| KRG95032 | Soybean | nucleus | 72.14 | 70.73 |
| Zm00001d047477_P001 | Maize | plastid | 70.15 | 69.46 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 69.65 | 69.31 |
| EER94856 | Sorghum | nucleus | 71.14 | 69.08 |
| TraesCS3B01G518200.1 | Wheat | cytosol | 45.27 | 68.94 |
| TraesCS4A01G138000.1 | Wheat | plastid, unclear | 71.14 | 68.75 |
| TraesCS4B01G154200.1 | Wheat | nucleus | 70.15 | 68.45 |
| TraesCS4D01G164400.1 | Wheat | nucleus | 69.65 | 67.63 |
| PGSC0003DMT400072220 | Potato | cytosol, endoplasmic reticulum, nucleus | 67.16 | 67.5 |
| TraesCS3A01G474500.1 | Wheat | nucleus | 63.68 | 67.37 |
| TraesCS3B01G518000.1 | Wheat | cytosol, nucleus, plastid | 67.66 | 67.0 |
| TraesCS3A01G474200.1 | Wheat | nucleus | 63.18 | 64.14 |
| TraesCS3B01G518300.1 | Wheat | cytosol, nucleus, plastid | 63.18 | 63.82 |
| TraesCS3B01G517400.1 | Wheat | cytosol | 63.18 | 63.82 |
| TraesCSU01G140100.1 | Wheat | nucleus | 62.69 | 63.32 |
| TraesCS3D01G470600.2 | Wheat | cytosol | 60.2 | 63.02 |
| TraesCS3A01G474600.1 | Wheat | cytosol | 62.19 | 62.81 |
| TraesCS3D01G470500.1 | Wheat | cytosol, nucleus, plastid | 58.71 | 62.77 |
| HORVU3Hr1G102520.6 | Barley | cytosol, nucleus | 63.18 | 61.35 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 62.19 | 60.68 |
| HORVU2Hr1G015260.1 | Barley | cytosol, nucleus, plastid | 60.7 | 60.4 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 61.19 | 60.29 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 62.69 | 60.29 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 62.19 | 60.1 |
| TraesCS3B01G518400.1 | Wheat | cytosol | 56.72 | 58.16 |
| TraesCS3A01G474800.1 | Wheat | cytosol, nucleus, plastid | 58.21 | 57.92 |
| GSMUA_Achr5P17540_001 | Banana | endoplasmic reticulum, extracellular, golgi | 68.66 | 57.74 |
| TraesCSU01G140000.1 | Wheat | nucleus | 57.21 | 56.65 |
| CDX86860 | Canola | cytosol | 59.7 | 56.6 |
| TraesCS3B01G517500.1 | Wheat | cytosol, golgi, nucleus | 53.23 | 47.56 |
| CDX99543 | Canola | nucleus | 40.8 | 45.56 |
| CDY54248 | Canola | cytosol | 49.25 | 44.59 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EnsemblPlants:CDY00769 | ProteinID:CDY00769 | ProteinID:CDY00769.1 |
| InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 |
| EnsemblPlantsGene:GSBRNA2T00110650001 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 |
| PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF16 | SMART:SM01407 | UniParc:UPI0001BA8EC8 |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g37530D
Coordinates
chrLK031921:+:1046927..1048400
Molecular Weight (calculated)
21750.2 Da
IEP (calculated)
4.139
GRAVY (calculated)
-0.697
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTEEKEILA AKLEEQKIDL DKPEVEDADD NDEDDSDDDD DAEGQEGETG GKSKQSRSEK KSRKAMLKLG MKPITGVSRV TVKKSKNVMF VISKPDVFKS
101: PASDTYVIFG EAKIEDLSSQ IQSQAAEQFK APDLSSMISK GESSSSAAVV QDDDEEVDEE GVEPKDVELV MTQAGVTRPK AVKALKAADG DIVSAIMELT
201: T
101: PASDTYVIFG EAKIEDLSSQ IQSQAAEQFK APDLSSMISK GESSSSAAVV QDDDEEVDEE GVEPKDVELV MTQAGVTRPK AVKALKAADG DIVSAIMELT
201: T
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.