Factsheet for Zm00001d029173_P004

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047477_P001	Maize	plastid	91.3	93.1
EER94856	Sorghum	nucleus	92.27	92.27
Zm00001d049830_P002	Maize	extracellular	90.34	89.9
TraesCS4A01G138000.1	Wheat	plastid, unclear	79.71	79.33
GSMUA_Achr10P...	Banana	nucleus	76.33	79.0
TraesCS4D01G164400.1	Wheat	nucleus	77.78	77.78
TraesCS4B01G154200.1	Wheat	nucleus	77.29	77.67
VIT_13s0067g00710.t01	Wine grape	nucleus	74.4	76.24
KRG95031	Soybean	endoplasmic reticulum	72.95	74.75
GSMUA_Achr1P11330_001	Banana	plasma membrane	71.98	74.5
Solyc10g081030.1.1	Tomato	nucleus	71.5	74.37
KRH66666	Soybean	endoplasmic reticulum	70.53	73.74
KRG95032	Soybean	nucleus	72.95	73.66
CDX73823	Canola	cytosol	71.5	73.63
CDY00769	Canola	cytosol	71.5	73.63
VIT_08s0040g00600.t01	Wine grape	cytosol	71.5	73.27
KRH66664	Soybean	endoplasmic reticulum	71.5	72.91
Solyc10g078150.1.1	Tomato	nucleus	69.57	72.73
Bra001450.1-P	Field mustard	cytosol	65.7	71.96
PGSC0003DMT400018552	Potato	nucleus	68.6	71.72
AT5G13850.1	Thale cress	cytosol	70.53	71.57
CDY08433	Canola	plasma membrane	70.53	71.57
Bra034757.1-P	Field mustard	cytosol	70.53	71.57
CDY42148	Canola	nucleus	70.05	71.43
Bra038716.1-P	Field mustard	cytosol	45.89	71.43
AT3G12390.1	Thale cress	cytosol	69.08	70.44
CDY50549	Canola	nucleus	68.6	70.3
CDX69622	Canola	cytosol	69.57	69.9
CDY71160	Canola	nucleus	67.63	69.31
Bra008797.1-P	Field mustard	cytosol	69.08	68.75
PGSC0003DMT400072220	Potato	cytosol, endoplasmic reticulum, nucleus	64.73	67.0
CDY09831	Canola	nucleus	66.67	66.99
GSMUA_Achr5P17540_001	Banana	endoplasmic reticulum, extracellular, golgi	68.12	59.0
Zm00001d048479_P002	Maize	plastid	58.94	53.51

Protein Annotations

Gene3D:1.10.8.10	EntrezGene:100282564	MapMan:19.1.2.1.1	Gene3D:2.20.70.30	UniProt:A0A1D6K372	ncoils:Coil
InterPro:EGD2/NACA	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005854
InterPro:IPR002715	InterPro:IPR038187	InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	ProteinID:ONL98104.1	PFAM:PF01849
PIRSF:PIRSF015901	PFscan:PS51151	PANTHER:PTHR21713	PANTHER:PTHR21713:SF8	SMART:SM01407	UniParc:UPI00084259FE
EnsemblPlantsGene:Zm00001d029173	EnsemblPlants:Zm00001d029173_P004	EnsemblPlants:Zm00001d029173_T004	SEG:seg	:	:

Description

Nascent polypeptide-associated complex alpha subunit-like protein

Coordinates

chr1:+:60948887..60951140

Molecular Weight (calculated)

22745.2 Da

IEP (calculated)

4.018

GRAVY (calculated)

-0.833

Length

207 amino acids

Sequence
(BLAST)

001: MTAQTAEELA TQIEQQKLEE QKTEAEEVVV EDEEEEDEDD DDDDKDDDEL DGQEGDASGK SKQSRSEKKS RKAMLKLGMK PITGVSRVTV KKSKNILFVI
101: SKPDVFKSPN SDTYVIFGEA KIEDLSSQLQ TQAAEQFKAP DLSQMILNPE TSGPGQEDND EEVDETGVEA KDIELVMTQA SVSRPKAVKA LKASNGDIVT
201: AIMDLTT

Best Arabidopsis Sequence Match ( AT3G12390.1 )
(BLAST)

001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT

Arabidopsis Description

Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.