Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G518200.1 | Wheat | cytosol | 65.41 | 65.91 |
| Bra001450.1-P | Field mustard | cytosol | 84.21 | 59.26 |
| CDY50549 | Canola | nucleus | 89.47 | 58.91 |
| CDY71160 | Canola | nucleus | 89.47 | 58.91 |
| Bra034757.1-P | Field mustard | cytosol | 84.96 | 55.39 |
| AT3G12390.1 | Thale cress | cytosol | 81.95 | 53.69 |
| TraesCS1D01G236500.1 | Wheat | cytosol | 78.95 | 51.22 |
| Solyc10g078150.1.1 | Tomato | nucleus | 75.94 | 51.01 |
| VIT_13s0067g00710.t01 | Wine grape | nucleus | 77.44 | 50.99 |
| Bra008797.1-P | Field mustard | cytosol | 79.7 | 50.96 |
| TraesCS1B01G248000.1 | Wheat | golgi, plastid, unclear | 78.2 | 50.73 |
| Solyc10g081030.1.1 | Tomato | nucleus | 75.19 | 50.25 |
| GSMUA_Achr10P... | Banana | nucleus | 75.19 | 50.0 |
| PGSC0003DMT400018552 | Potato | nucleus | 74.44 | 50.0 |
| HORVU1Hr1G057970.2 | Barley | nucleus | 77.44 | 49.28 |
| KRH66664 | Soybean | endoplasmic reticulum | 75.19 | 49.26 |
| PGSC0003DMT400072220 | Potato | cytosol, endoplasmic reticulum, nucleus | 73.68 | 49.0 |
| Os01t0938900-02 | Rice | nucleus | 73.68 | 48.51 |
| GSMUA_Achr1P11330_001 | Banana | plasma membrane | 72.93 | 48.5 |
| Os05t0373700-01 | Rice | extracellular, golgi, plasma membrane, plastid | 73.68 | 47.8 |
| KRH66666 | Soybean | endoplasmic reticulum | 70.68 | 47.47 |
| KRG95031 | Soybean | endoplasmic reticulum | 71.43 | 47.03 |
| Zm00001d029173_P004 | Maize | nucleus | 71.43 | 45.89 |
| KRG95032 | Soybean | nucleus | 70.68 | 45.85 |
| TraesCS4A01G138000.1 | Wheat | plastid, unclear | 70.68 | 45.19 |
| VIT_08s0040g00600.t01 | Wine grape | cytosol | 68.42 | 45.05 |
| Zm00001d047477_P001 | Maize | plastid | 67.67 | 44.34 |
| Zm00001d049830_P002 | Maize | extracellular | 69.17 | 44.23 |
| TraesCS4B01G154200.1 | Wheat | nucleus | 68.42 | 44.17 |
| EER94856 | Sorghum | nucleus | 67.67 | 43.48 |
| EES15306 | Sorghum | nucleus | 67.67 | 43.48 |
| TraesCS4D01G164400.1 | Wheat | nucleus | 67.67 | 43.48 |
| TraesCS3B01G518000.1 | Wheat | cytosol, nucleus, plastid | 64.66 | 42.36 |
| TraesCS3A01G474500.1 | Wheat | nucleus | 58.65 | 41.05 |
| Bra012259.1-P | Field mustard | cytosol | 57.89 | 40.1 |
| TraesCS3D01G470600.2 | Wheat | cytosol | 57.89 | 40.1 |
| TraesCS3D01G470500.1 | Wheat | cytosol, nucleus, plastid | 55.64 | 39.36 |
| TraesCS3A01G474600.1 | Wheat | cytosol | 58.65 | 39.2 |
| TraesCS3B01G518300.1 | Wheat | cytosol, nucleus, plastid | 58.65 | 39.2 |
| HORVU3Hr1G102520.6 | Barley | cytosol, nucleus | 60.9 | 39.13 |
| TraesCS3A01G474200.1 | Wheat | nucleus | 57.89 | 38.89 |
| TraesCS3B01G517400.1 | Wheat | cytosol | 57.89 | 38.69 |
| GSMUA_Achr5P17540_001 | Banana | endoplasmic reticulum, extracellular, golgi | 69.17 | 38.49 |
| TraesCSU01G140000.1 | Wheat | nucleus | 58.65 | 38.42 |
| TraesCSU01G140100.1 | Wheat | nucleus | 57.14 | 38.19 |
| HORVU2Hr1G015260.1 | Barley | cytosol, nucleus, plastid | 57.14 | 37.62 |
| Bra000711.1-P | Field mustard | cytosol, nucleus, plastid | 57.89 | 37.02 |
| Bra037920.1-P | Field mustard | cytosol | 58.65 | 36.79 |
| TraesCS3B01G518400.1 | Wheat | cytosol | 54.14 | 36.73 |
| TraesCS3A01G474800.1 | Wheat | cytosol, nucleus, plastid | 55.64 | 36.63 |
| TraesCS3B01G517500.1 | Wheat | cytosol, golgi, nucleus | 44.36 | 26.22 |
Protein Annotations
| Gene3D:1.10.8.10 | MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | EnsemblPlantsGene:Bra038716 | EnsemblPlants:Bra038716.1 | EnsemblPlants:Bra038716.1-P |
| InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 |
| InterPro:IPR002715 | InterPro:IPR038187 | UniProt:M4FCA0 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 |
| PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF16 | SMART:SM01407 | UniParc:UPI0002545242 | SEG:seg |
Description
AT3G12390 (E=1e-037) | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative
Coordinates
chrA01:-:26450759..26451836
Molecular Weight (calculated)
14354.9 Da
IEP (calculated)
3.956
GRAVY (calculated)
-0.256
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTEEKEILA AKLEEQKIDI MFVISKPDVF KSPASDTYVI FGEAKIEDLS SQMQSQAAEQ FKAPDLSNVI KGESSSSAAA VVQDDDEDVD EDGVEPKDIE
101: LVMTQAGVTR PKAVKALKSA DGDIVTAIME LTT
101: LVMTQAGVTR PKAVKALKSA DGDIVTAIME LTT
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.