Factsheet for TraesCS1D01G236500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G248000.1	Wheat	golgi, plastid, unclear	97.56	97.56
HORVU1Hr1G057970.2	Barley	nucleus	94.15	92.34
VIT_13s0067g00710.t01	Wine grape	nucleus	80.0	81.19
GSMUA_Achr10P...	Banana	nucleus	78.54	80.5
Os05t0373700-01	Rice	extracellular, golgi, plasma membrane, plastid	80.49	80.49
Solyc10g078150.1.1	Tomato	nucleus	76.59	79.29
Bra038716.1-P	Field mustard	cytosol	51.22	78.95
Solyc10g081030.1.1	Tomato	nucleus	76.1	78.39
KRH66664	Soybean	endoplasmic reticulum	77.56	78.33
VIT_08s0040g00600.t01	Wine grape	cytosol	77.07	78.22
GSMUA_Achr1P11330_001	Banana	plasma membrane	76.1	78.0
KRG95031	Soybean	endoplasmic reticulum	76.59	77.72
AT3G12390.1	Thale cress	cytosol	76.59	77.34
PGSC0003DMT400018552	Potato	nucleus	74.63	77.27
KRH66666	Soybean	endoplasmic reticulum	74.63	77.27
CDY71160	Canola	nucleus	75.12	76.24
CDY50549	Canola	nucleus	74.63	75.74
Bra001450.1-P	Field mustard	cytosol	69.76	75.66
CDY00769	Canola	cytosol	74.15	75.62
CDX73823	Canola	cytosol	74.15	75.62
KRG95032	Soybean	nucleus	75.12	75.12
CDY08433	Canola	plasma membrane	73.66	74.02
Bra034757.1-P	Field mustard	cytosol	73.66	74.02
CDY42148	Canola	nucleus	72.2	72.91
AT5G13850.1	Thale cress	cytosol	72.2	72.55
TraesCS4D01G164400.1	Wheat	nucleus	72.68	71.98
CDX69622	Canola	cytosol	72.2	71.84
PGSC0003DMT400072220	Potato	cytosol, endoplasmic reticulum, nucleus	69.76	71.5
Bra008797.1-P	Field mustard	cytosol	72.2	71.15
CDY09831	Canola	nucleus	70.24	69.9
TraesCS3D01G470600.2	Wheat	cytosol	63.41	67.71
TraesCS3D01G470500.1	Wheat	cytosol, nucleus, plastid	59.51	64.89
GSMUA_Achr5P17540_001	Banana	endoplasmic reticulum, extracellular, golgi	72.68	62.34
TraesCS4D01G342400.1	Wheat	nucleus	58.54	54.05

Protein Annotations

EnsemblPlants:TraesCS1D01G236500.1	EnsemblPlantsGene:TraesCS1D01G236500	Gene3D:1.10.8.10	Gene3D:2.20.70.30	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005854	InterPro:EGD2/NACA	InterPro:IPR002715	InterPro:IPR038187
InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	PANTHER:PTHR21713	PANTHER:PTHR21713:SF16	PFAM:PF01849	PFscan:PS51151
PIRSF:PIRSF015901	SEG:seg	SMART:SM01407	TIGR:cd14358	MapMan:19.1.2.1.1	:

Description

No Description!

Coordinates

chr1D:+:325962115..325964477

Molecular Weight (calculated)

22225.6 Da

IEP (calculated)

4.034

GRAVY (calculated)

-0.654

Length

205 amino acids

Sequence
(BLAST)

001: MTAETATQAE LLRAVLEEQK LAAQGDEPVV EDDDDEEDED DDDQDDKDDD VEGVDASGRS KQSRSEKKSR KAMLKLGMKT ITGVSRVTVK KSKNILFVIS
101: KPDVFKSPAS DTYVIFGEAK IEDLSSQLQS QAAEQFKAPD LSSVISNPEA STAVQEDDED CDETGVEPKD IELVMTQAGV PRPKAVKALK SADGDIVSAI
201: MELTN

Best Arabidopsis Sequence Match ( AT3G12390.1 )
(BLAST)

001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT

Arabidopsis Description

Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.