Factsheet for Os05t0373700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid, extracellular

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 19038476
golgi: 25047511
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

msms PMID: 25047511 doi

Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han

Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0938900-02	Rice	nucleus	80.0	81.19
TraesCS1D01G236500.1	Wheat	cytosol	80.49	80.49
TraesCS1B01G248000.1	Wheat	golgi, plastid, unclear	80.49	80.49
KRH66666	Soybean	endoplasmic reticulum	77.56	80.3
VIT_13s0067g00710.t01	Wine grape	nucleus	78.54	79.7
GSMUA_Achr10P...	Banana	nucleus	77.56	79.5
Solyc10g078150.1.1	Tomato	nucleus	76.59	79.29
HORVU1Hr1G057970.2	Barley	nucleus	80.0	78.47
GSMUA_Achr1P11330_001	Banana	plasma membrane	76.1	78.0
PGSC0003DMT400018552	Potato	nucleus	75.12	77.78
KRG95031	Soybean	endoplasmic reticulum	76.1	77.23
Solyc10g081030.1.1	Tomato	nucleus	73.66	75.88
KRH66664	Soybean	endoplasmic reticulum	74.63	75.37
VIT_08s0040g00600.t01	Wine grape	cytosol	73.66	74.75
AT3G12390.1	Thale cress	cytosol	73.66	74.38
Bra038716.1-P	Field mustard	cytosol	47.8	73.68
KRG95032	Soybean	nucleus	73.66	73.66
CDY00769	Canola	cytosol	72.2	73.63
CDX73823	Canola	cytosol	72.2	73.63
CDY50549	Canola	nucleus	71.22	72.28
CDY08433	Canola	plasma membrane	71.71	72.06
Bra034757.1-P	Field mustard	cytosol	71.71	72.06
CDY71160	Canola	nucleus	70.73	71.78
AT5G13850.1	Thale cress	cytosol	71.22	71.57
Bra001450.1-P	Field mustard	cytosol	65.85	71.43
CDY42148	Canola	nucleus	70.73	71.43
CDX69622	Canola	cytosol	71.22	70.87
Bra008797.1-P	Field mustard	cytosol	71.22	70.19
PGSC0003DMT400072220	Potato	cytosol, endoplasmic reticulum, nucleus	67.32	69.0
CDY09831	Canola	nucleus	69.27	68.93
GSMUA_Achr5P17540_001	Banana	endoplasmic reticulum, extracellular, golgi	74.15	63.6
Os03t0121700-01	Rice	plasma membrane	63.41	58.82
Os07t0407300-00	Rice	cytosol, nucleus, plastid	23.41	39.34
Os01t0698900-00	Rice	plasma membrane	53.17	28.53

Protein Annotations

Gene3D:1.10.8.10	MapMan:19.1.2.1.1	Gene3D:2.20.70.30	EntrezGene:4338602	ProteinID:AAT58840.1	EMBL:AB110178
EMBL:AK058906	ProteinID:BAF17283.2	ProteinID:BAS93712.1	ncoils:Coil	ProteinID:EEE63500.1	InterPro:EGD2/NACA
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005854	InterPro:IPR002715
InterPro:IPR038187	InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	EnsemblPlantsGene:Os05g0373700	EnsemblPlants:Os05t0373700-01	PFAM:PF01849
PIRSF:PIRSF015901	PFscan:PS51151	PANTHER:PTHR21713	PANTHER:PTHR21713:SF8	UniProt:Q7XXR8	SMART:SM01407
UniParc:UPI00001AB0C2	RefSeq:XP_015637322.1	SEG:seg	:	:	:

Description

Similar to Nascent polypeptide-associated complex alpha subunit-like protein 3 (NAC-alpha-like protein 3) (Alpha-NAC-like protein 3). (Os05t0373700-01)

Coordinates

chr5:+:18012302..18014219

Molecular Weight (calculated)

22278.7 Da

IEP (calculated)

4.093

GRAVY (calculated)

-0.744

Length

205 amino acids

Sequence
(BLAST)

001: MTAAEIGKQE EELRAQIEEQ KLNEGDEPVV VEDDDDDEDD DDEDDKDDDD AEGGDASGRS KQSRSEKKSR KAMVKLGMKS ITGVSRVTVK KSKNILFVIS
101: KPDVFKSPTS DTYVIFGEAK IEDLSSQLQT QAAEQFKAPD LSSMLSKPEA STAAQEDDEA VDETGVEPKD IELVMTQATV SRSKAVKALK AANGDIVTAI
201: MELTT

Best Arabidopsis Sequence Match ( AT3G12390.1 )
(BLAST)

001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT

Arabidopsis Description

Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.