Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0407300-00 | Rice | cytosol, nucleus, plastid | 25.92 | 81.15 |
| Os03t0121700-01 | Rice | plasma membrane | 43.98 | 76.02 |
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 25.65 | 71.53 |
| TraesCS4B01G347400.1 | Wheat | nucleus | 36.13 | 62.73 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 36.39 | 62.61 |
| TraesCS5A01G516100.1 | Wheat | nucleus | 35.86 | 61.71 |
| Zm00001d048479_P002 | Maize | plastid | 36.65 | 61.4 |
| EER95617 | Sorghum | cytosol | 34.82 | 58.85 |
| Solyc03g080160.2.1 | Tomato | nucleus | 31.15 | 58.33 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 30.89 | 56.19 |
| Os01t0938900-02 | Rice | nucleus | 28.8 | 54.46 |
| CDY31855 | Canola | cytosol | 19.37 | 54.01 |
| PGSC0003DMT400001566 | Potato | cytosol | 28.8 | 53.92 |
| KRH64284 | Soybean | endoplasmic reticulum | 30.63 | 53.67 |
| KRH64285 | Soybean | endoplasmic reticulum | 31.15 | 53.36 |
| Os05t0373700-01 | Rice | extracellular, golgi, plasma membrane, plastid | 28.53 | 53.17 |
| KRH53644 | Soybean | endoplasmic reticulum | 30.89 | 52.91 |
| GSMUA_Achr1P06350_001 | Banana | cytosol | 29.32 | 52.34 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 28.53 | 52.15 |
| KRH53645 | Soybean | endoplasmic reticulum | 30.1 | 51.11 |
| Bra037920.1-P | Field mustard | cytosol | 28.27 | 50.94 |
| CDX86860 | Canola | cytosol | 28.27 | 50.94 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 26.96 | 50.49 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 27.23 | 50.0 |
| Bra000711.1-P | Field mustard | cytosol, nucleus, plastid | 27.23 | 50.0 |
| CDX99543 | Canola | nucleus | 23.3 | 49.44 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 26.44 | 49.03 |
| Bra012259.1-P | Field mustard | cytosol | 24.08 | 47.92 |
| AT3G49470.2 | Thale cress | cytosol | 29.06 | 47.84 |
| GSMUA_Achr5P20310_001 | Banana | mitochondrion | 20.94 | 40.4 |
| CDY54248 | Canola | cytosol | 23.3 | 40.09 |
Protein Annotations
| EnsemblPlants:Os01t0698900-00 | EnsemblPlantsGene:Os01g0698900 | Gene3D:2.20.70.30 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005854 | InterPro:EGD2/NACA | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf |
| InterPro:Nas_poly-pep-assoc_cplx_dom | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 | PFAM:PF01849 | PFscan:PS51151 | ProteinID:BAS73874.1 |
| SEG:seg | SMART:SM01407 | UniParc:UPI0000DD8CAF | UniProt:A0A0P0V707 | MapMan:19.1.2.1.1 | : |
Description
Similar to nascent polypeptide-associated complex alpha subunit-like protein. (Os01t0698900-00)
Coordinates
chr1:+:28914457..28915902
Molecular Weight (calculated)
41206.0 Da
IEP (calculated)
10.101
GRAVY (calculated)
-0.561
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MSACHVISLS LPSSLSHSSL PPRFLLLLSL SLPVGRSAGR CGRGGGRRRG NGEARRQPGG APRRPCEARD AGGGSDRGRR GGRGGSRCCN REPLLVRAPP
101: PQVVVATASL ARILLLLLDM VSEQTPVATA EAELVSSAAV PVKPEEAAAK AQPEDDAPIV EDAKDDDDGD EDDDDDGDED EHGEHGAVVN KGSKQSRSEK
201: KSRKAMMKLG MKPVTGVSRI TIERAKNILF VVSKPHDVFK SPTSESYVIF GEAKIEDLSS QLQAQAAQQF RMQDLSKVMS KPDAAAAAPA DEEQEVDETG
301: IEPRDIDVVM TQASSSSPPP YRRHRRHRVI RRRVVVACPS VSSSPPPRRR RRVARRLLLS RLTLVVSSAA GRLAHRTKEK SV
101: PQVVVATASL ARILLLLLDM VSEQTPVATA EAELVSSAAV PVKPEEAAAK AQPEDDAPIV EDAKDDDDGD EDDDDDGDED EHGEHGAVVN KGSKQSRSEK
201: KSRKAMMKLG MKPVTGVSRI TIERAKNILF VVSKPHDVFK SPTSESYVIF GEAKIEDLSS QLQAQAAQQF RMQDLSKVMS KPDAAAAAPA DEEQEVDETG
301: IEPRDIDVVM TQASSSSPPP YRRHRRHRVI RRRVVVACPS VSSSPPPRRR RRVARRLLLS RLTLVVSSAA GRLAHRTKEK SV
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.