Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G084900.2 | Barley | mitochondrion | 32.43 | 52.55 |
| CDY31855 | Canola | cytosol | 31.98 | 51.82 |
| CDX69622 | Canola | cytosol | 46.4 | 50.0 |
| CDY09831 | Canola | nucleus | 45.95 | 49.51 |
| CDX73823 | Canola | cytosol | 44.59 | 49.25 |
| CDY00769 | Canola | cytosol | 44.59 | 49.25 |
| CDY71160 | Canola | nucleus | 42.79 | 47.03 |
| CDY50549 | Canola | nucleus | 42.34 | 46.53 |
| CDY42148 | Canola | nucleus | 41.89 | 45.81 |
| VIT_16s0098g00830.t01 | Wine grape | cytosol, nucleus, plastid | 43.24 | 45.71 |
| Solyc03g080160.2.1 | Tomato | nucleus | 41.89 | 45.59 |
| CDY08433 | Canola | plasma membrane | 41.44 | 45.1 |
| GSMUA_Achr1P06350_001 | Banana | cytosol | 43.24 | 44.86 |
| PGSC0003DMT400001566 | Potato | cytosol | 40.99 | 44.61 |
| CDY31852 | Canola | cytosol, nucleus, plastid | 40.99 | 43.54 |
| CDX90758 | Canola | cytosol, nucleus, plastid | 40.54 | 43.27 |
| Os03t0121700-01 | Rice | plasma membrane | 42.79 | 42.99 |
| CDY05102 | Canola | cytosol, nucleus, plastid | 39.19 | 42.65 |
| EER95617 | Sorghum | cytosol | 43.24 | 42.48 |
| TraesCS4B01G347400.1 | Wheat | nucleus | 41.89 | 42.27 |
| CDY01344 | Canola | cytosol, nucleus, plastid | 39.19 | 42.23 |
| KRH64284 | Soybean | endoplasmic reticulum | 41.44 | 42.2 |
| KRH53644 | Soybean | endoplasmic reticulum | 42.34 | 42.15 |
| CDX86860 | Canola | cytosol | 40.09 | 41.98 |
| TraesCS5A01G516100.1 | Wheat | nucleus | 41.89 | 41.89 |
| TraesCS4D01G342400.1 | Wheat | nucleus | 41.89 | 41.89 |
| Zm00001d048479_P002 | Maize | plastid | 42.79 | 41.67 |
| KRH64285 | Soybean | endoplasmic reticulum | 41.44 | 41.26 |
| CDX99543 | Canola | nucleus | 32.88 | 40.56 |
| KRH53645 | Soybean | endoplasmic reticulum | 40.99 | 40.44 |
| GSMUA_Achr5P20310_001 | Banana | mitochondrion | 31.08 | 34.85 |
| GSMUA_Achr11P... | Banana | cytosol | 24.77 | 33.33 |
| Os07t0407300-00 | Rice | cytosol, nucleus, plastid | 16.22 | 29.51 |
| HORVU3Hr1G102230.1 | Barley | nucleus | 11.26 | 25.25 |
| Os01t0698900-00 | Rice | plasma membrane | 40.09 | 23.3 |
Protein Annotations
| MapMan:19.1.2.1.1 | Gene3D:2.20.70.30 | UniProt:A0A078IYQ7 | EnsemblPlants:CDY54248 | ProteinID:CDY54248 | ProteinID:CDY54248.1 |
| InterPro:EGD2/NACA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 |
| EnsemblPlantsGene:GSBRNA2T00013650001 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 |
| PIRSF:PIRSF015901 | PFscan:PS51151 | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF7 | SMART:SM01407 | UniParc:UPI0004EF3A32 |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g53870DBnaC09g53870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYQ7]
Coordinates
chrLK033294:-:49606..51176
Molecular Weight (calculated)
25076.1 Da
IEP (calculated)
9.364
GRAVY (calculated)
-0.532
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSKVVLWRI NLILDREVDK RMTKSSQRRI RLCPRVRKGD EVKYFADGVL KWISRGEQFS TDAAGDSVGK PKVREDEEVK NAGGHDGEAS VWSKQSRSEK
101: KSHKAMLKLG MKHVLGVSRV TIKKAKKFIL FVISKPDVFK RPESDTYVIF GEAKIEDLSS QLQTQQFKAH DLSSMISKEE TLIGAAAAAA QDDEEVDEEG
201: VEPKDIELVM TQAACYHKTL FF
101: KSHKAMLKLG MKHVLGVSRV TIKKAKKFIL FVISKPDVFK RPESDTYVIF GEAKIEDLSS QLQTQQFKAH DLSSMISKEE TLIGAAAAAA QDDEEVDEEG
201: VEPKDIELVM TQAACYHKTL FF
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.