Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034099.1-P | Field mustard | cytosol | 98.31 | 76.82 |
| CDY41328 | Canola | cytosol | 98.31 | 76.82 |
| CDY54855 | Canola | cytosol | 85.59 | 66.89 |
| CDY44127 | Canola | cytosol | 85.59 | 66.89 |
| AT4G23680.1 | Thale cress | cytosol | 78.81 | 61.59 |
| CDY68854 | Canola | cytosol | 72.88 | 56.95 |
| CDY66340 | Canola | cytosol | 72.88 | 56.95 |
| CDY70188 | Canola | cytosol | 72.88 | 56.95 |
| AT4G23670.1 | Thale cress | cytosol | 72.88 | 56.95 |
| CDY17667 | Canola | cytosol | 72.03 | 56.29 |
| CDY10958 | Canola | cytosol | 71.19 | 55.63 |
| CDY67068 | Canola | cytosol | 71.19 | 55.63 |
| CDY70133 | Canola | cytosol | 71.19 | 55.63 |
| CDY66633 | Canola | cytosol | 70.34 | 54.97 |
| CDY62739 | Canola | cytosol | 69.49 | 54.3 |
| CDY41329 | Canola | cytosol | 68.64 | 53.64 |
| CDY49951 | Canola | cytosol | 66.1 | 51.66 |
| CDY10959 | Canola | cytosol | 63.56 | 51.02 |
| CDY35450 | Canola | cytosol | 50.0 | 50.43 |
| CDX81683 | Canola | cytosol | 61.86 | 48.34 |
| CDY53523 | Canola | cytosol | 38.14 | 45.92 |
| CDY68124 | Canola | cytosol | 58.47 | 45.7 |
| CDY54858 | Canola | cytosol | 38.14 | 44.55 |
| CDY68125 | Canola | cytosol | 47.46 | 39.16 |
| CDY56716 | Canola | cytosol | 21.19 | 36.76 |
| CDY72258 | Canola | cytosol | 27.97 | 30.28 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 24.58 | 19.21 |
| KRG89345 | Soybean | nucleus | 21.19 | 16.34 |
| KRH50391 | Soybean | cytosol | 14.41 | 13.49 |
Protein Annotations
| EnsemblPlants:CDY22226 | EnsemblPlantsGene:GSBRNA2T00018652001 | Gene3D:3.30.530.20 | GO:A0A078GA03 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PANTHER:PTHR31338:SF18 | PFAM:PF00407 | ProteinID:CDY22226 | ProteinID:CDY22226.1 | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI0004EDD1C5 | UniProt:A0A078GA03 | MapMan:35.1 | : | : | : |
Description
BnaC01g38750DBnaC01g38750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GA03]
Coordinates
chrLK032128:-:642672..645518
Molecular Weight (calculated)
13764.4 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.693
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGTYVTE VPLKGAAEKH YKKSWNYTWD GKEEVFKEKR EVDDENLTLV LRGLEGHVME QLKVFDVIYQ FIPKTEDTSS CKITIIWEKR KDEYPEPSTY
101: MKFNKSLIVD MGHHASKA
101: MKFNKSLIVD MGHHASKA
001: MATSGTYVTE VPLKGSAEKH YKRWRSENHL FPDAIGHHIQ GVTIHDGEWD SHGAIKIWNY TCDGKPEVFK ERREIDDENM AVTFRGLEGH VMEQLKVYDV
101: IFQFIQKSPD DIICKITMIW EKQNDDMPEP SNYMKFVKSL AADMDDHVLK A
101: IFQFIQKSPD DIICKITMIW EKQNDDMPEP SNYMKFVKSL AADMDDHVLK A
Arabidopsis Description
MLP328MLP-like protein 328 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.