Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89345 | Soybean | nucleus | 39.07 | 38.56 |
| KRH50391 | Soybean | cytosol | 30.46 | 36.51 |
| CDX81683 | Canola | cytosol | 29.8 | 29.8 |
| AT1G14930.1 | Thale cress | cytosol | 30.46 | 29.68 |
| CDY68125 | Canola | cytosol | 27.15 | 28.67 |
| CDY70188 | Canola | cytosol | 28.48 | 28.48 |
| Bra010541.1-P | Field mustard | cytosol | 28.48 | 28.48 |
| CDY68124 | Canola | cytosol | 27.81 | 27.81 |
| CDY66340 | Canola | cytosol | 27.81 | 27.81 |
| CDY41329 | Canola | cytosol | 27.81 | 27.81 |
| Bra034100.1-P | Field mustard | cytosol | 27.81 | 27.81 |
| Bra026176.1-P | Field mustard | cytosol | 27.81 | 27.45 |
| AT2G01520.1 | Thale cress | cytosol | 27.15 | 27.15 |
| CDY49951 | Canola | cytosol | 27.15 | 27.15 |
| Bra017446.1-P | Field mustard | cytosol | 27.15 | 27.15 |
| AT1G14940.1 | Thale cress | cytosol | 27.81 | 27.1 |
| AT1G14950.1 | Thale cress | cytosol | 27.81 | 27.1 |
| AT1G30990.1 | Thale cress | cytosol | 27.15 | 26.97 |
| AT1G14960.1 | Thale cress | cytosol | 27.15 | 26.8 |
| AT4G14060.1 | Thale cress | cytosol | 26.49 | 26.49 |
| AT2G01530.1 | Thale cress | cytosol | 26.49 | 26.49 |
| Bra026653.1-P | Field mustard | cytosol | 25.83 | 25.83 |
| CDY70133 | Canola | cytosol | 25.83 | 25.83 |
| CDY67068 | Canola | cytosol | 25.83 | 25.83 |
| AT3G26460.1 | Thale cress | cytosol | 25.83 | 25.66 |
| CDY35450 | Canola | cytosol | 19.87 | 25.64 |
| Bra013721.1-P | Field mustard | cytosol | 25.17 | 25.17 |
| CDY68854 | Canola | cytosol | 25.17 | 25.17 |
| AT4G23670.1 | Thale cress | cytosol | 25.17 | 25.17 |
| CDY44127 | Canola | cytosol | 25.17 | 25.17 |
| CDY66633 | Canola | cytosol | 25.17 | 25.17 |
| CDY54855 | Canola | cytosol | 25.17 | 25.17 |
| AT3G26450.1 | Thale cress | cytosol | 25.17 | 25.0 |
| CDY22226 | Canola | cytosol | 19.21 | 24.58 |
| Bra024879.1-P | Field mustard | cytosol | 24.5 | 24.5 |
| Bra034099.1-P | Field mustard | cytosol | 24.5 | 24.5 |
| CDY41328 | Canola | cytosol | 24.5 | 24.5 |
| CDY17667 | Canola | cytosol | 24.5 | 24.5 |
| Bra019280.1-P | Field mustard | cytosol | 23.84 | 23.84 |
| CDY10958 | Canola | cytosol | 23.84 | 23.84 |
| AT4G23680.1 | Thale cress | cytosol | 23.84 | 23.84 |
| CDY62739 | Canola | cytosol | 23.18 | 23.18 |
| CDY53523 | Canola | cytosol | 14.57 | 22.45 |
| CDY54858 | Canola | cytosol | 14.57 | 21.78 |
| Bra026793.1-P | Field mustard | cytosol | 25.83 | 21.2 |
| Bra019278.1-P | Field mustard | cytosol | 21.19 | 20.25 |
| CDY56716 | Canola | cytosol | 8.61 | 19.12 |
| CDY10959 | Canola | cytosol | 18.54 | 19.05 |
| CDY72258 | Canola | cytosol | 10.6 | 14.68 |
Protein Annotations
| EntrezGene:100245649 | wikigene:100245649 | Gene3D:3.30.530.20 | MapMan:35.1 | InterPro:Bet_v_I/MLP | ProteinID:CCB50821 |
| ProteinID:CCB50821.1 | UniProt:F6HFH2 | EMBL:FN595752 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 |
| GO:GO:0009607 | InterPro:IPR023393 | EntrezGene:LOC100245649 | wikigene:LOC100245649 | PFAM:PF00407 | PANTHER:PTHR31338 |
| SMART:SM01037 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI00015C872D | ArrayExpress:VIT_01s0011g05140 | EnsemblPlantsGene:VIT_01s0011g05140 |
| EnsemblPlants:VIT_01s0011g05140.t01 | unigene:Vvi.24951 | RefSeq:XP_002284516 | RefSeq:XP_002284516.1 | : | : |
Description
No Description!
Coordinates
chr1:+:4774514..4775637
Molecular Weight (calculated)
17081.0 Da
IEP (calculated)
5.284
GRAVY (calculated)
-0.558
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTAKVETE TEIKAPADKF FKLFRSQAHH LPNICSDKIH KIEVHEGDWE TQGSVKHWSY TIGGNSQSIK ETVESIDEEN RSITFKVLDG EVLKEYKSYK
101: FTAQAIPKGE GSLVIWTIEY EKASEGGPDP HNYLEFAVNI TKDIESHLLN A
101: FTAQAIPKGE GSLVIWTIEY EKASEGGPDP HNYLEFAVNI TKDIESHLLN A
001: MAEASSLVGK LETEVEIKAS AKKFHHMFTE RPHHVSKATP DKIHGCELHE GDWGKVGSIV IWKYVHDGKL TVGKNKIEAV DPEKNLITFK VLEGDLMNEY
101: KSFAFTLQVT PKQGESGSIA HWHLEYEKIS EEVAHPETLL QFCVEISKEI DEHLLAEE
101: KSFAFTLQVT PKQGESGSIA HWHLEYEKIS EEVAHPETLL QFCVEISKEI DEHLLAEE
Arabidopsis Description
MLP43MLP-like protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.