Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G14960.1 | Thale cress | cytosol | 69.08 | 68.63 |
| Bra026176.1-P | Field mustard | cytosol | 65.13 | 64.71 |
| CDY68124 | Canola | cytosol | 63.82 | 64.24 |
| AT1G14950.1 | Thale cress | cytosol | 62.5 | 61.29 |
| CDY68125 | Canola | cytosol | 55.92 | 59.44 |
| AT4G14060.1 | Thale cress | cytosol | 57.89 | 58.28 |
| AT2G01520.1 | Thale cress | cytosol | 57.24 | 57.62 |
| AT1G14930.1 | Thale cress | cytosol | 58.55 | 57.42 |
| AT2G01530.1 | Thale cress | cytosol | 55.92 | 56.29 |
| AT1G14940.1 | Thale cress | cytosol | 55.92 | 54.84 |
| AT4G23680.1 | Thale cress | cytosol | 53.29 | 53.64 |
| AT4G23670.1 | Thale cress | cytosol | 52.63 | 52.98 |
| AT3G26460.1 | Thale cress | cytosol | 51.97 | 51.97 |
| AT3G26450.1 | Thale cress | cytosol | 50.66 | 50.66 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 26.97 | 27.15 |
| KRG89345 | Soybean | nucleus | 20.39 | 20.26 |
| KRH50391 | Soybean | cytosol | 15.79 | 19.05 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | EntrezGene:839985 | ProteinID:AAF98202.1 | ProteinID:AEE31304.1 | ArrayExpress:AT1G30990 |
| EnsemblPlantsGene:AT1G30990 | RefSeq:AT1G30990 | TAIR:AT1G30990 | RefSeq:AT1G30990-TAIR-G | EnsemblPlants:AT1G30990.1 | TAIR:AT1G30990.1 |
| InterPro:Bet_v_I/MLP | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009607 | InterPro:IPR023393 |
| RefSeq:NP_174385.1 | PFAM:PF00407 | PO:PO:0000084 | PO:PO:0000256 | PO:PO:0000262 | PO:PO:0009005 |
| PANTHER:PTHR31338 | PANTHER:PTHR31338:SF18 | UniProt:Q9FYJ0 | SMART:SM01037 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf |
| UniParc:UPI00000A4F09 | : | : | : | : | : |
Description
F17F8.9 [Source:UniProtKB/TrEMBL;Acc:Q9FYJ0]
Coordinates
chr1:+:11051999..11053295
Molecular Weight (calculated)
17593.7 Da
IEP (calculated)
4.708
GRAVY (calculated)
-0.684
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMSGTYMTD VPLNGSAEKH YKLWSSETHR IPDTIGHLIQ GVILHEGDWD SHGSIKTWKY NLDGKEEEFK ERTEIDEEKM AVTMTALDGQ VMEELKVYIP
101: NLQFIPESQN ACVCKVSVKW EKRTEDSEPA KFYKFLEKMI ADSDDHILHN QE
101: NLQFIPESQN ACVCKVSVKW EKRTEDSEPA KFYKFLEKMI ADSDDHILHN QE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.