Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54855 | Canola | cytosol | 81.46 | 81.46 |
| CDY44127 | Canola | cytosol | 81.46 | 81.46 |
| Bra013721.1-P | Field mustard | cytosol | 81.46 | 81.46 |
| AT4G23680.1 | Thale cress | cytosol | 79.47 | 79.47 |
| CDY41328 | Canola | cytosol | 75.5 | 75.5 |
| Bra034099.1-P | Field mustard | cytosol | 74.83 | 74.83 |
| CDY22226 | Canola | cytosol | 56.95 | 72.88 |
| AT2G01520.1 | Thale cress | cytosol | 71.52 | 71.52 |
| AT2G01530.1 | Thale cress | cytosol | 70.2 | 70.2 |
| AT4G14060.1 | Thale cress | cytosol | 70.2 | 70.2 |
| AT3G26460.1 | Thale cress | cytosol | 68.87 | 68.42 |
| AT3G26450.1 | Thale cress | cytosol | 64.9 | 64.47 |
| AT1G14950.1 | Thale cress | cytosol | 65.56 | 63.87 |
| AT1G14940.1 | Thale cress | cytosol | 64.9 | 63.23 |
| AT1G14930.1 | Thale cress | cytosol | 63.58 | 61.94 |
| AT1G14960.1 | Thale cress | cytosol | 61.59 | 60.78 |
| AT1G30990.1 | Thale cress | cytosol | 52.98 | 52.63 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 25.17 | 25.17 |
| KRH50391 | Soybean | cytosol | 20.53 | 24.6 |
| KRG89345 | Soybean | nucleus | 24.5 | 24.18 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | EntrezGene:828467 | UniProt:A0A178URY2 | ProteinID:AEE84793.1 | EMBL:AF389297 |
| EMBL:AK317658 | ArrayExpress:AT4G23670 | EnsemblPlantsGene:AT4G23670 | RefSeq:AT4G23670 | TAIR:AT4G23670 | RefSeq:AT4G23670-TAIR-G |
| EnsemblPlants:AT4G23670.1 | TAIR:AT4G23670.1 | EMBL:AY084471 | EMBL:AY091676 | InterPro:Bet_v_I/MLP | ProteinID:CAA23033.1 |
| ProteinID:CAB79322.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0042742 |
| GO:GO:0046686 | InterPro:IPR023393 | RefSeq:NP_194098.1 | ProteinID:OAO96826.1 | PFAM:PF00407 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31338 | PANTHER:PTHR31338:SF18 | UniProt:Q9SUR0 | SMART:SM01037 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | UniParc:UPI000005EB35 | : | : | : | : |
Description
AT4G23670 protein [Source:UniProtKB/TrEMBL;Acc:Q9SUR0]
Coordinates
chr4:-:12332429..12333904
Molecular Weight (calculated)
17518.7 Da
IEP (calculated)
6.344
GRAVY (calculated)
-0.742
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGTYVTE VPLKGSAEKH YKSWKSENHV FADAIGHHIQ NVVVHEGEHD SHGSIRSWDY TYDGKKEMFK EKREIDDENK TLTKRGLDGH VMEHLKVFDI
101: IYEFIPKSED SCVCKITMIW EKRNDDFPEP SGYMKFVKQM VVDIEGHVNK A
101: IYEFIPKSED SCVCKITMIW EKRNDDFPEP SGYMKFVKQM VVDIEGHVNK A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.