Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G26450.1 | Thale cress | cytosol | 86.18 | 86.18 |
| AT2G01520.1 | Thale cress | cytosol | 75.0 | 75.5 |
| AT4G14060.1 | Thale cress | cytosol | 75.0 | 75.5 |
| CDY62739 | Canola | cytosol | 72.37 | 72.85 |
| AT2G01530.1 | Thale cress | cytosol | 72.37 | 72.85 |
| Bra019280.1-P | Field mustard | cytosol | 72.37 | 72.85 |
| CDY10958 | Canola | cytosol | 72.37 | 72.85 |
| AT4G23680.1 | Thale cress | cytosol | 70.39 | 70.86 |
| AT4G23670.1 | Thale cress | cytosol | 68.42 | 68.87 |
| CDY10959 | Canola | cytosol | 65.79 | 68.03 |
| Bra019278.1-P | Field mustard | cytosol | 69.74 | 67.09 |
| AT1G14930.1 | Thale cress | cytosol | 63.82 | 62.58 |
| AT1G14950.1 | Thale cress | cytosol | 63.82 | 62.58 |
| AT1G14940.1 | Thale cress | cytosol | 62.5 | 61.29 |
| AT1G14960.1 | Thale cress | cytosol | 61.18 | 60.78 |
| AT1G30990.1 | Thale cress | cytosol | 51.97 | 51.97 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 25.66 | 25.83 |
| KRG89345 | Soybean | nucleus | 25.0 | 24.84 |
| KRH50391 | Soybean | cytosol | 20.39 | 24.6 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | EntrezGene:822251 | UniProt:A0A178VMM9 | ProteinID:AEE77163.1 | ArrayExpress:AT3G26460 |
| EnsemblPlantsGene:AT3G26460 | RefSeq:AT3G26460 | TAIR:AT3G26460 | RefSeq:AT3G26460-TAIR-G | EnsemblPlants:AT3G26460.1 | TAIR:AT3G26460.1 |
| ProteinID:BAB02207.1 | InterPro:Bet_v_I/MLP | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009607 |
| InterPro:IPR023393 | RefSeq:NP_189277.1 | ProteinID:OAP06701.1 | PFAM:PF00407 | PO:PO:0000293 | PO:PO:0009005 |
| PO:PO:0020100 | PANTHER:PTHR31338 | PANTHER:PTHR31338:SF18 | UniProt:Q9LIM9 | SMART:SM01037 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | UniParc:UPI000009E35A | : | : | : | : |
Description
Major latex protein-like [Source:UniProtKB/TrEMBL;Acc:Q9LIM9]
Coordinates
chr3:-:9683682..9684657
Molecular Weight (calculated)
17774.0 Da
IEP (calculated)
4.808
GRAVY (calculated)
-0.718
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGTYVTE VPLKGTAEKH FQRWRNENHL FPDAVGHHIQ GVSVHDGEWD THGSIKIWNY TLGDGKQEEF KERREMDDEN NTMKVVGLEG HVMEQLKVYE
101: IDFQFIPKSE EDCICKITMI WEKRNDDFPE PSSYMQLLKS MVIDMEDHVL KA
101: IDFQFIPKSE EDCICKITMI WEKRNDDFPE PSSYMQLLKS MVIDMEDHVL KA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.