Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra000267.1-P | |
| Bra004709.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G26450.1 | Bra000267.1-P | AT2G42580.1 | 19000166 |
| AT3G26450.1 | Bra004709.1-P | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10959 | Canola | cytosol | 91.77 | 98.64 |
| Bra019280.1-P | Field mustard | cytosol | 73.42 | 76.82 |
| Bra013721.1-P | Field mustard | cytosol | 70.89 | 74.17 |
| Bra010541.1-P | Field mustard | cytosol | 67.09 | 70.2 |
| AT3G26460.1 | Thale cress | cytosol | 67.09 | 69.74 |
| Bra017446.1-P | Field mustard | cytosol | 66.46 | 69.54 |
| Bra034100.1-P | Field mustard | cytosol | 65.82 | 68.87 |
| Bra034099.1-P | Field mustard | cytosol | 65.19 | 68.21 |
| Bra026653.1-P | Field mustard | cytosol | 64.56 | 67.55 |
| AT3G26450.1 | Thale cress | cytosol | 64.56 | 67.11 |
| Bra024879.1-P | Field mustard | cytosol | 63.29 | 66.23 |
| Bra026176.1-P | Field mustard | cytosol | 58.86 | 60.78 |
| Bra026793.1-P | Field mustard | cytosol | 53.16 | 45.65 |
| KRG89345 | Soybean | nucleus | 20.89 | 21.57 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 20.25 | 21.19 |
| KRH50391 | Soybean | cytosol | 16.46 | 20.63 |
Protein Annotations
| EnsemblPlants:Bra019278.1 | EnsemblPlants:Bra019278.1-P | EnsemblPlantsGene:Bra019278 | Gene3D:3.30.530.20 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PANTHER:PTHR31338:SF18 | PFAM:PF00407 | SMART:SM01037 | SUPFAM:SSF55961 | UniParc:UPI0002540F04 | UniProt:M4DRY5 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT4G23670 (E=8e-057) | major latex protein-related / MLP-related
Coordinates
chrA03:-:25281319..25281973
Molecular Weight (calculated)
18267.1 Da
IEP (calculated)
7.988
GRAVY (calculated)
-0.552
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGTYVTE VPLKGTAEKH YKRWKSENFL FPDAIGHHIQ NVTVRRRMGL PRGYVCHGYG HYGSTLYCSN GKQEVFKEKR EIDDENKTMT VRGLEGHVME
101: LFKVYDLIGQ FIPKTEDSCI CKITMVWEKR NDEVPEPSSY MKLLKSMVVD MDDHVLKA
101: LFKVYDLIGQ FIPKTEDSCI CKITMVWEKR NDEVPEPSSY MKLLKSMVVD MDDHVLKA
001: MATSGTYVTE VPLKGSAEKH YKRWRSENHL FPDAIGHHIQ GVTIHDGEWD SHGAIKIWNY TCDGKPEVFK ERREIDDENM AVTFRGLEGH VMEQLKVYDV
101: IFQFIQKSPD DIICKITMIW EKQNDDMPEP SNYMKFVKSL AADMDDHVLK A
101: IFQFIQKSPD DIICKITMIW EKQNDDMPEP SNYMKFVKSL AADMDDHVLK A
Arabidopsis Description
MLP328MLP-like protein 328 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.