Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56716 | Canola | cytosol | 41.84 | 60.29 |
| CDY54858 | Canola | cytosol | 55.1 | 53.47 |
| AT1G14940.1 | Thale cress | cytosol | 76.53 | 48.39 |
| AT1G14930.1 | Thale cress | cytosol | 73.47 | 46.45 |
| CDY17667 | Canola | cytosol | 71.43 | 46.36 |
| CDY44127 | Canola | cytosol | 71.43 | 46.36 |
| CDY54855 | Canola | cytosol | 71.43 | 46.36 |
| CDY68854 | Canola | cytosol | 70.41 | 45.7 |
| CDY41328 | Canola | cytosol | 70.41 | 45.7 |
| CDY49951 | Canola | cytosol | 70.41 | 45.7 |
| CDY70188 | Canola | cytosol | 69.39 | 45.03 |
| CDY66340 | Canola | cytosol | 69.39 | 45.03 |
| CDY72258 | Canola | cytosol | 50.0 | 44.95 |
| CDX81683 | Canola | cytosol | 68.37 | 44.37 |
| CDY66633 | Canola | cytosol | 68.37 | 44.37 |
| CDY70133 | Canola | cytosol | 66.33 | 43.05 |
| CDY67068 | Canola | cytosol | 66.33 | 43.05 |
| CDY62739 | Canola | cytosol | 64.29 | 41.72 |
| CDY41329 | Canola | cytosol | 64.29 | 41.72 |
| CDY68124 | Canola | cytosol | 64.29 | 41.72 |
| CDY10958 | Canola | cytosol | 64.29 | 41.72 |
| CDY22226 | Canola | cytosol | 45.92 | 38.14 |
| CDY10959 | Canola | cytosol | 57.14 | 38.1 |
| CDY68125 | Canola | cytosol | 54.08 | 37.06 |
| CDY35450 | Canola | cytosol | 38.78 | 32.48 |
| VIT_01s0011g05140.t01 | Wine grape | cytosol | 22.45 | 14.57 |
| KRH50391 | Soybean | cytosol | 18.37 | 14.29 |
| KRG89345 | Soybean | nucleus | 21.43 | 13.73 |
Protein Annotations
| EnsemblPlants:CDY53523 | EnsemblPlantsGene:GSBRNA2T00010870001 | Gene3D:3.30.530.20 | GO:A0A078IX02 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PANTHER:PTHR31338:SF18 | PFAM:PF00407 | ProteinID:CDY53523 | ProteinID:CDY53523.1 | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI0004EF40B3 | UniProt:A0A078IX02 | MapMan:35.1 | : | : | : |
Description
BnaC05g11170DBnaC05g11170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IX02]
Coordinates
chrLK033210:+:33931..34427
Molecular Weight (calculated)
11131.1 Da
IEP (calculated)
6.890
GRAVY (calculated)
-0.730
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MAISGTYVAQ VPLKGSVEKH YKRWKSGNHI FSDAIGHHIQ GVAIHDGDWD SHGSIRSWNI TCDGKPEVFK EKREVDDEKM TLTLRGLDQG HEVEKYNI
001: MAMSGKYVAE VPLKGSAEKH YRRWRSQNNL FPDAIGHHVQ GVTVHDGDWD SHGSIKSWNY TLDGKPEVIK EKREIDDEKM ALTFRGLEGH VMEKYKKYEV
101: ILQFIPKSNE GCVCKVTLIW ENRNEDSPEP INYMKFVKSL VADMDDHILK GQNKA
101: ILQFIPKSNE GCVCKVTLIW ENRNEDSPEP INYMKFVKSL VADMDDHILK GQNKA
Arabidopsis Description
Major latex homologue type2 [Source:UniProtKB/TrEMBL;Acc:Q96274]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.