Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61202 | Canola | cytosol | 95.53 | 95.53 |
| CDY55390 | Canola | cytosol | 85.84 | 86.1 |
| CDY51514 | Canola | cytosol | 85.69 | 85.95 |
| AT2G42580.1 | Thale cress | cytosol | 86.74 | 84.23 |
| CDX71941 | Canola | cytosol | 72.13 | 71.81 |
| CDY49237 | Canola | cytosol | 70.79 | 71.21 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 23.4 | 59.47 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 60.06 | 56.76 |
| KRH22291 | Soybean | plastid | 48.73 | 55.99 |
| GSMUA_Achr10P... | Banana | cytosol | 52.46 | 52.77 |
| Os01t0218200-00 | Rice | plastid | 50.52 | 50.45 |
| EES02247 | Sorghum | plastid | 51.42 | 50.44 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 50.22 | 50.15 |
| Zm00001d039362_P002 | Maize | cytosol | 49.78 | 49.85 |
| CDY25722 | Canola | cytosol, plastid | 49.48 | 49.78 |
| CDY00576 | Canola | cytosol | 8.64 | 49.57 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 49.63 | 49.55 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 49.78 | 49.48 |
| Zm00001d008930_P003 | Maize | cytosol | 49.78 | 49.48 |
| CDY02514 | Canola | cytosol, plastid | 49.03 | 49.1 |
| CDY25865 | Canola | cytosol | 47.84 | 48.78 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 49.78 | 48.76 |
| CDY45930 | Canola | cytosol | 47.84 | 48.71 |
| KRH27037 | Soybean | nucleus | 48.73 | 48.44 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 46.8 | 48.38 |
| EES01073 | Sorghum | cytosol | 47.54 | 46.84 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 49.48 | 46.63 |
| Zm00001d044479_P001 | Maize | cytosol | 47.09 | 46.4 |
| Os05t0210600-01 | Rice | cytosol | 27.72 | 46.38 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 46.5 | 46.36 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 34.72 | 46.32 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 15.2 | 45.95 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 45.45 | 45.8 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 46.94 | 45.78 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 47.24 | 45.68 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 46.8 | 45.64 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 46.8 | 45.64 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 47.24 | 45.42 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 47.09 | 45.34 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 46.05 | 44.91 |
| Os05t0587300-01 | Rice | cytosol | 36.96 | 44.68 |
| Zm00001d011352_P001 | Maize | cytosol | 45.16 | 44.49 |
| OQU78515 | Sorghum | cytosol | 46.2 | 44.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.99 | 42.54 |
| CDY08814 | Canola | cytosol, plastid | 24.89 | 39.76 |
| CDX78366 | Canola | cytosol | 26.38 | 39.69 |
| CDX81156 | Canola | cytosol | 26.38 | 39.69 |
| CDX97619 | Canola | cytosol | 41.28 | 38.21 |
| CDX98517 | Canola | cytosol | 41.13 | 38.12 |
| CDY32327 | Canola | cytosol | 41.28 | 38.0 |
| CDY20095 | Canola | nucleus | 40.83 | 37.64 |
| CDX85779 | Canola | cytosol | 28.76 | 33.57 |
| CDY40077 | Canola | cytosol | 28.46 | 33.22 |
| CDX88420 | Canola | cytosol | 25.63 | 32.7 |
| CDX69861 | Canola | cytosol, mitochondrion | 27.27 | 32.68 |
| CDX79246 | Canola | cytosol | 24.89 | 32.62 |
| CDX68030 | Canola | cytosol | 24.74 | 32.61 |
| CDX87474 | Canola | cytosol | 25.48 | 32.51 |
| CDY21634 | Canola | cytosol, mitochondrion | 27.12 | 32.5 |
| CDY40820 | Canola | mitochondrion | 13.41 | 32.03 |
| CDY68462 | Canola | cytosol | 27.12 | 30.9 |
| CDY34222 | Canola | cytosol | 14.16 | 30.84 |
| CDY34223 | Canola | cytosol | 14.9 | 30.67 |
| CDY34224 | Canola | cytosol | 3.13 | 30.43 |
| Zm00001d009724_P009 | Maize | cytosol | 43.22 | 27.13 |
| CDY39682 | Canola | cytosol | 9.69 | 23.47 |
| CDX72245 | Canola | cytosol | 8.79 | 22.43 |
| CDY65185 | Canola | cytosol | 9.24 | 22.38 |
| CDY28190 | Canola | extracellular | 2.98 | 19.61 |
| CDX68662 | Canola | endoplasmic reticulum, mitochondrion | 2.98 | 19.61 |
| CDX85780 | Canola | nucleus | 10.28 | 14.56 |
| Zm00001d006366_P001 | Maize | cytosol | 0.15 | 0.43 |
| Zm00001d033961_P001 | Maize | cytosol | 0.15 | 0.43 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | GO:A0A078HY71 | UniProt:A0A078HY71 | EnsemblPlants:CDY42827 |
| ProteinID:CDY42827 | ProteinID:CDY42827.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00075511001 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 | PFAM:PF00085 | PFAM:PF07719 |
| PFAM:PF13174 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF374 | SMART:SM00028 |
| SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_2 | InterPro:TPR_repeat |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0004EDBC6C | SEG:seg | : | : |
Description
BnaC03g23790DBnaC03g23790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HY71]
Coordinates
chrLK032535:-:241138..243840
Molecular Weight (calculated)
73685.2 Da
IEP (calculated)
9.273
GRAVY (calculated)
-0.419
Length
671 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHSRRLSLE PAIDSTSRRF RDSLTLQRDD DVNKPDFREL DLGSPVSTLM PRVSSAAATP TSSSGSSGSV SGKPSVTSQM VKSHSGEISR SGMPTTTRNL
101: KPGHRRSSST GTPLIFSSSS FYSGASQSSG ATSAVSPSPT VLPAGNICPS GRILKTGMAT RTSTRAETLW TGTGNYGHGN VVKSGGGITG KTNHAVARAA
201: VHGETPEELK RLGNDMYRRG NFTEALSFYD RAISLSPENA SYRSNRAAAL TALRRLGEAV KECLEAVRLD PSYSRGHQRL ASLYLRLGEA ENARQHLCFS
301: GQCPDQADLQ RLQTLEKHLR RCWEARKIGD WRTAVKETNA AIANGADSSP QLVACKAEVL LRLNHIEESQ FCLSCTPRLD HHQSQAKLFG MVAEAYVLCI
401: QAQVDMALGR FENGVVKAER ASMLDQTNPE LVSVLNSVKM VVKARTRGNE LFSSGRYSEA SVAYGDGLKH DSSNSVLYCN RAACWYKLGL WEKSVEDCNH
501: ALKIHPSYIK ALLRRAASYG KLGRWEDAVR DYEFVRRELP GDSEVAASLE RAKTALSQES KSLGFNNEVE AVSSLDKFKN SVSLPGVSVF HFKSSSNRQC
601: EEISPYVNTL CLRYPLVHFF MVDVEESLAL AKAESIRKVP TFKMYKNGDK VKEMICPSHQ FLEDSIKHFL L
101: KPGHRRSSST GTPLIFSSSS FYSGASQSSG ATSAVSPSPT VLPAGNICPS GRILKTGMAT RTSTRAETLW TGTGNYGHGN VVKSGGGITG KTNHAVARAA
201: VHGETPEELK RLGNDMYRRG NFTEALSFYD RAISLSPENA SYRSNRAAAL TALRRLGEAV KECLEAVRLD PSYSRGHQRL ASLYLRLGEA ENARQHLCFS
301: GQCPDQADLQ RLQTLEKHLR RCWEARKIGD WRTAVKETNA AIANGADSSP QLVACKAEVL LRLNHIEESQ FCLSCTPRLD HHQSQAKLFG MVAEAYVLCI
401: QAQVDMALGR FENGVVKAER ASMLDQTNPE LVSVLNSVKM VVKARTRGNE LFSSGRYSEA SVAYGDGLKH DSSNSVLYCN RAACWYKLGL WEKSVEDCNH
501: ALKIHPSYIK ALLRRAASYG KLGRWEDAVR DYEFVRRELP GDSEVAASLE RAKTALSQES KSLGFNNEVE AVSSLDKFKN SVSLPGVSVF HFKSSSNRQC
601: EEISPYVNTL CLRYPLVHFF MVDVEESLAL AKAESIRKVP TFKMYKNGDK VKEMICPSHQ FLEDSIKHFL L
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.